RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 KPNB1Q14974 876 aaKnown RBP17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 ARMC4Q5T2S8 1044 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 ANKRD34AQ69YU3 496 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 ZNF787Q6DD87 383 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 TMEM179BQ7Z7N9 219 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 STEAP2Q8NFT2 490 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 GNPDA2Q8TDQ7 276 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 FAM222BQ8WU58 562 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 ASB10Q8WXI3 467 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 KISS1RQ969F8 398 aaPredicted RBP17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 DACH2Q96NX9 599 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 WFIKKN1Q96NZ8 548 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 TXNIPQ9H3M7 391 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 NTN4Q9HB63 628 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 TAS2R16Q9NYV7 291 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 KCNN3Q9UGI6 736 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 NDRG3Q9UGV2 375 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 AP4S1Q9Y587 144 aa17.08■□□□□ 0.32
CROCCP4-202ENST00000633627 SH3D21A4FU49 640 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 MCIDASD6RGH6 385 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 RPL36A-HNRNPH2H7BZ11 118 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 HNRNPRO43390 633 aaKnown RBP17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 GASTP01350 101 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 MPGP29372 298 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 DNAJA1P31689 397 aaKnown RBP17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 CTXN1P60606 82 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 TAF11Q15544 211 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 ZSCAN26Q16670 478 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 PHYHD1Q5SRE7 291 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 THSD4Q6ZMP0 1018 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 BHLHA15Q7RTS1 189 aaPredicted RBP17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 IGFN1Q86VF2 1251 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 ZNF295-AS1Q8N0V1 137 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 SLC25A44Q96H78 314 aaPredicted RBP17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 ALKBH3Q96Q83 286 aaPredicted RBP17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 RAB3IPQ96QF0 476 aaPredicted RBP17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 ACTR6Q9GZN1 396 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 DENND2DQ9H6A0 471 aaPredicted RBP17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 DCHS2Q6V1P9 2916 aa17.07■□□□□ 0.32
CROCCP4-202ENST00000633627 GNGT2O14610 69 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 DEAF1O75398 565 aaPredicted RBP17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 KRT33AO76009 404 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 NDUFB2O95178 105 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 CD14P08571 375 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 PGA4P0DJD7 388 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 PGA3P0DJD8 388 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 EPXP11678 715 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 PPP3CBP16298 524 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 IL32P24001 234 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 DAP3P51398 398 aaKnown RBP17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 RPL27P61353 136 aaKnown RBP17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 RUNX1T1Q06455 604 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 CARD17Q5XLA6 110 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 ABHD12BQ7Z5M8 362 aaPredicted RBP17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 GPR137CQ8N3F9 429 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 AQP11Q8NBQ7 271 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 GIPC3Q8TF64 312 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 TMEM54Q969K7 222 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 S100PBPQ96BU1 408 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 BOD1Q96IK1 185 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 MUS81Q96NY9 551 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 GPX7Q96SL4 187 aaPredicted RBP17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 USB1Q9BQ65 265 aaKnown RBP17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 DGCR6LQ9BY27 220 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 MRPL13Q9BYD1 178 aaKnown RBP17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 GPR35Q9HC97 309 aa17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 ZNF346Q9UL40 294 aaKnown RBP17.06■□□□□ 0.32
CROCCP4-202ENST00000633627 SETXQ7Z333 2677 aaKnown RBP17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 ARRDC5A6NEK1 342 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 CENPBD1B2RD01 187 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 ZNF587BE7ETH6 402 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 THBDP07204 575 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 ROR2Q01974 943 aaKnown RBP17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 ATP6AP1Q15904 470 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 GABRA6Q16445 453 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 HIST3H3Q16695 136 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 C9orf135Q5VTT2 229 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 SMARCD3Q6STE5 483 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 FAM122BQ7Z309 247 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 C1orf162Q8NEQ5 155 aaPredicted RBP17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 OR10G2Q8NGC3 310 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 OR6N1Q8NGY5 312 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 ZNF519Q8TB69 540 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 ZNF566Q969W8 418 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 MARVELD3Q96A59 401 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 ZNF837Q96EG3 531 aaPredicted RBP17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 MED18Q9BUE0 208 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 KATNB1Q9BVA0 655 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 NRIP3Q9NQ35 241 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 MGAT4BQ9UQ53 548 aa17.05■□□□□ 0.32
CROCCP4-202ENST00000633627 CACNA1DQ01668 2161 aa17.04■□□□□ 0.32
CROCCP4-202ENST00000633627 CIB4A0PJX0 185 aa17.04■□□□□ 0.32
CROCCP4-202ENST00000633627 M0R3G1 203 aa17.04■□□□□ 0.32
CROCCP4-202ENST00000633627 TRMUO75648 421 aaKnown RBP17.04■□□□□ 0.32
CROCCP4-202ENST00000633627 ACADSP16219 412 aa17.04■□□□□ 0.32
CROCCP4-202ENST00000633627 RPL4P36578 427 aaKnown RBP17.04■□□□□ 0.32
CROCCP4-202ENST00000633627 CSNK1A1P48729 337 aa17.04■□□□□ 0.32
CROCCP4-202ENST00000633627 ERVK-25P63136 954 aa17.04■□□□□ 0.32
CROCCP4-202ENST00000633627 TGFBR3Q03167 851 aa17.04■□□□□ 0.32
CROCCP4-202ENST00000633627 DAZAP2Q15038 168 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms