RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 SERPINA12Q8IW75 414 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 KLHL15Q96M94 604 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 SLC46A1Q96NT5 459 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 LAT2Q9GZY6 243 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 CHRNA10Q9GZZ6 450 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 WDR76Q9H967 626 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 LANCL2Q9NS86 450 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 NKIRAS2Q9NYR9 191 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 KLK11Q9UBX7 282 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 MSRAQ9UJ68 235 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 HEATR5AQ86XA9 2040 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 ARPC4-TTLL3A0A0A6YYG9 625 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 A0A1W2PPC4 97 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 F13BP05160 661 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 ALOX5APP20292 161 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 LCN1P31025 176 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 VEGFCP49767 419 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 TAS2R20P59543 309 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 RPS15P62841 145 aaKnown RBP11.59□□□□□ -0.55
LINC00540-203ENST00000631321 DMWDQ09019 674 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 GRM7Q14831 915 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 TCTE1Q5JU00 501 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 SPICQ8N5J4 248 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 OR2G2Q8NGZ5 317 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 C1orf216Q8TAB5 229 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 DACT3Q96B18 629 aaPredicted RBP11.59□□□□□ -0.55
LINC00540-203ENST00000631321 KTI12Q96EK9 354 aaPredicted RBP11.59□□□□□ -0.55
LINC00540-203ENST00000631321 KLHDC7BQ96G42 594 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 NXF5Q9H1B4 397 aaKnown RBP11.59□□□□□ -0.55
LINC00540-203ENST00000631321 FKRPQ9H9S5 495 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 SRA1Q9HD15 236 aaKnown RBP11.59□□□□□ -0.55
LINC00540-203ENST00000631321 GRHPRQ9UBQ7 328 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 CYP8B1Q9UNU6 501 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 FKBP7Q9Y680 259 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 A0A1W2PQ72 361 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 FRG2CA6NGY1 282 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 TMEM212A6NML5 194 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 PRKNO60260 465 aaPredicted RBP11.58□□□□□ -0.56
LINC00540-203ENST00000631321 KHDRBS3O75525 346 aaKnown RBP11.58□□□□□ -0.56
LINC00540-203ENST00000631321 AKR7A3O95154 331 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 IL5P05113 134 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 CPN1P15169 458 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 CD1CP29017 333 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 SLC6A8P48029 635 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 CCR4P51679 360 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 GLDNQ6ZMI3 551 aaPredicted RBP11.58□□□□□ -0.56
LINC00540-203ENST00000631321 METTL27Q8N6F8 245 aaPredicted RBP11.58□□□□□ -0.56
LINC00540-203ENST00000631321 FAM174AQ8TBP5 190 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 OR10A4Q9H209 315 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 BEX1Q9HBH7 125 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 TAS2R5Q9NYW4 299 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 LAMP5Q9UJQ1 280 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 MMACHCQ9Y4U1 282 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 TMEM14AQ9Y6G1 99 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 SLCO1B1Q9Y6L6 691 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 PHYHO14832 338 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 GLSO94925 669 aaPredicted RBP11.58□□□□□ -0.56
LINC00540-203ENST00000631321 RENP00797 406 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 SDHBP21912 280 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 TACR3P29371 465 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 DHODHQ02127 395 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 FDX2Q6P4F2 183 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 ZNF321PQ8N8H1 164 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 OR2T35Q8NGX2 323 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 ZNF417Q8TAU3 575 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 TAAR8Q969N4 342 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 METTL17Q9H7H0 456 aaPredicted RBP11.58□□□□□ -0.56
LINC00540-203ENST00000631321 NOX3Q9HBY0 568 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 TAS2R10Q9NYW0 307 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 EIF3KQ9UBQ5 218 aaKnown RBP11.58□□□□□ -0.56
LINC00540-203ENST00000631321 TMEM131Q92545 1883 aa11.58□□□□□ -0.56
LINC00540-203ENST00000631321 TVP23AA6NH52 213 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 ARPC1BO15143 372 aaKnown RBP11.57□□□□□ -0.56
LINC00540-203ENST00000631321 NDUFB5O43674 189 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 ICMTO60725 284 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 NDUFB6O95139 128 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 MPC2O95563 127 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 BGLAPP02818 100 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 IGKV3-11P04433 115 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 IFNGR1P15260 489 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 RORAP35398 523 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 SOX2P48431 317 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 ZNF81P51508 661 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 BLVRAP53004 296 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 AP2S1P53680 142 aaPredicted RBP11.57□□□□□ -0.56
LINC00540-203ENST00000631321 RASGEF1BQ0VAM2 473 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 SNTA1Q13424 505 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 RAB30Q15771 203 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 ELMOD2Q8IZ81 293 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 SDR16C5Q8N3Y7 309 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 GPR148Q8TDV2 347 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 MCHR2Q969V1 340 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 ADIPOR1Q96A54 375 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 KLHDC3Q9BQ90 382 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 MRTO4Q9UKD2 239 aaKnown RBP11.57□□□□□ -0.56
LINC00540-203ENST00000631321 NUP210LQ5VU65 1888 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 TRAV8-7A0A075B6U6 113 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 IGKV3D-11A0A0A0MRZ8 115 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 RPS10-NUDT3A0A1W2PQS6 291 aa11.57□□□□□ -0.56
LINC00540-203ENST00000631321 SNRPGP15A8MWD9 76 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms