RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CARD17Q5XLA6 110 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 ANKRD34AQ69YU3 496 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 P2RY8Q86VZ1 359 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 C20orf196Q8IYI0 205 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 TMEM123Q8N131 208 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 ZNF433Q8N7K0 673 aaPredicted RBP12.57□□□□□ -0.4
CTSA-219ENST00000607841 C1orf162Q8NEQ5 155 aaPredicted RBP12.57□□□□□ -0.4
CTSA-219ENST00000607841 HSD17B8Q92506 261 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 ZNF566Q969W8 418 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 SLCO4A1Q96BD0 722 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 S100PBPQ96BU1 408 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 DUS3LQ96G46 650 aaKnown RBP12.57□□□□□ -0.4
CTSA-219ENST00000607841 WFIKKN1Q96NZ8 548 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 TXNIPQ9H3M7 391 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 ARMC1Q9NVT9 282 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 DNAJB9Q9UBS3 223 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 AP4S1Q9Y587 144 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 ICE1Q9Y2F5 2266 aa12.57□□□□□ -0.4
CTSA-219ENST00000607841 INTS1Q8N201 2190 aaKnown RBP12.56□□□□□ -0.4
CTSA-219ENST00000607841 RPL36A-HNRNPH2H7BZ11 118 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 M0R3G1 203 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 KLF4O43474 513 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 PTP4A3O75365 173 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 DEAF1O75398 565 aaPredicted RBP12.56□□□□□ -0.4
CTSA-219ENST00000607841 E2F6O75461 281 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 NDUFB2O95178 105 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 GOSR1O95249 250 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 IGHG1P01857 330 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 FCGR1AP12314 374 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 NR2C1P13056 603 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 CSNK1A1P48729 337 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 SH3BGRP55822 239 aaPredicted RBP12.56□□□□□ -0.4
CTSA-219ENST00000607841 ACTR3P61158 418 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 ROR2Q01974 943 aaKnown RBP12.56□□□□□ -0.4
CTSA-219ENST00000607841 TSPAN31Q12999 210 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 MELKQ14680 651 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 TIMM23BQ5SRD1 257 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 C1QTNF12Q5T7M4 302 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 FAM205BPQ63HN1 556 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 ZNF787Q6DD87 383 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 PGBD2Q6P3X8 592 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 C17orf78Q8N4C9 275 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 MUCL1Q96DR8 90 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 C14orf79Q96F83 325 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 MUS81Q96NY9 551 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 ALKBH3Q96Q83 286 aaPredicted RBP12.56□□□□□ -0.4
CTSA-219ENST00000607841 SIGLEC7Q9Y286 467 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 SPTBN1Q01082 2364 aaKnown RBP12.56□□□□□ -0.4
CTSA-219ENST00000607841 NBPF19A0A087WUL8 3843 aa12.56□□□□□ -0.4
CTSA-219ENST00000607841 PTPN13Q12923 2485 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 A6NIZ1 184 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 RAD51DO75771 328 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 IGHMP01871 453 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 CD14P08571 375 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 ITGA5P08648 1049 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 ACADSP16219 412 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 GSTM3P21266 225 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 FASP25445 335 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 SSTR2P30874 369 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 HOXC12P31275 282 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 GSSP48637 474 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 CLRN1P58418 232 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 RAP1BP61224 184 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 RPL27P61353 136 aaKnown RBP12.55□□□□□ -0.4
CTSA-219ENST00000607841 RAP1AP62834 184 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 PPP1R8Q12972 351 aaKnown RBP12.55□□□□□ -0.4
CTSA-219ENST00000607841 FHL1Q13642 323 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 DAZAP2Q15038 168 aaPredicted RBP12.55□□□□□ -0.4
CTSA-219ENST00000607841 TSC22D1Q15714 1073 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 STK11Q15831 433 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 ZSCAN26Q16670 478 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 ARMC4Q5T2S8 1044 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 RPL13AP3Q6NVV1 102 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 SMARCD3Q6STE5 483 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 LRRC75AQ8NAA5 344 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 AQP11Q8NBQ7 271 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 OR10G2Q8NGC3 310 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 OR9Q2Q8NGE9 314 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 FNDC8Q8TC99 324 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 GIPC3Q8TF64 312 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 ASB10Q8WXI3 467 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 GPA33Q99795 319 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 POLDIP3Q9BY77 421 aaKnown RBP12.55□□□□□ -0.4
CTSA-219ENST00000607841 ULBP2Q9BZM5 246 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 CRLF2Q9HC73 371 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 GPR35Q9HC97 309 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 NGBQ9NPG2 151 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 VNN3Q9NY84 501 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 GLTPQ9NZD2 209 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 GRHPRQ9UBQ7 328 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 ZNF346Q9UL40 294 aaKnown RBP12.55□□□□□ -0.4
CTSA-219ENST00000607841 MGAT4BQ9UQ53 548 aa12.55□□□□□ -0.4
CTSA-219ENST00000607841 ARRDC5A6NEK1 342 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 OR5H1A6NKK0 313 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 TIPRLO75663 272 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 GASTP01350 101 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 PGA4P0DJD7 388 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 PGA3P0DJD8 388 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 CDH2P19022 906 aaPredicted RBP12.54□□□□□ -0.4
CTSA-219ENST00000607841 PAX7P23759 505 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms