RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 TSPAN31Q12999 210 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 DAZAP2Q15038 168 aaPredicted RBP12.23□□□□□ -0.45
RNF40-212ENST00000602784 ACKR1Q16570 336 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 MICAQ29983 383 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 OR7E24Q6IFN5 339 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 PGBD2Q6P3X8 592 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 C20orf196Q8IYI0 205 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 C1orf162Q8NEQ5 155 aaPredicted RBP12.23□□□□□ -0.45
RNF40-212ENST00000602784 GNPDA2Q8TDQ7 276 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 WFIKKN1Q96NZ8 548 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 GPA33Q99795 319 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 EMC6Q9BV81 110 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 TXNIPQ9H3M7 391 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 MCCC2Q9HCC0 563 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 CRIM1Q9NZV1 1036 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 AP4S1Q9Y587 144 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 CRYBG3Q68DQ2 2970 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 CELSR2Q9HCU4 2923 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 SH3D21A4FU49 640 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 UPK3AO75631 287 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 SERPINI2O75830 405 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 NDUFB2O95178 105 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 GOSR1O95249 250 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 CD14P08571 375 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 ITGA5P08648 1049 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 FCGR1AP12314 374 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 ERFP50548 548 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 SH3BGRP55822 239 aaPredicted RBP12.22□□□□□ -0.45
RNF40-212ENST00000602784 STK11Q15831 433 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 ZSCAN26Q16670 478 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 ARMC4Q5T2S8 1044 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 FAM205BPQ63HN1 556 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 BHLHA15Q7RTS1 189 aaPredicted RBP12.22□□□□□ -0.45
RNF40-212ENST00000602784 GPR137CQ8N3F9 429 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 LINC01560Q8TB33 94 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 ASB10Q8WXI3 467 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 HSD17B8Q92506 261 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 ZNF566Q969W8 418 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 NRBF2Q96F24 287 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 C14orf79Q96F83 325 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 MUS81Q96NY9 551 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 GPX7Q96SL4 187 aaPredicted RBP12.22□□□□□ -0.45
RNF40-212ENST00000602784 MED18Q9BUE0 208 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 DGCR6LQ9BY27 220 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 MRPL13Q9BYD1 178 aaKnown RBP12.22□□□□□ -0.45
RNF40-212ENST00000602784 ACTR6Q9GZN1 396 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 B3GAT2Q9NPZ5 323 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 MGAT4BQ9UQ53 548 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 U3KQV3 271 aa12.22□□□□□ -0.45
RNF40-212ENST00000602784 MCIDASD6RGH6 385 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 LYZL6O75951 148 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 GASTP01350 101 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 IGHG1P01857 330 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 PGA4P0DJD7 388 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 PGA3P0DJD8 388 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 ACADSP16219 412 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 ZNF26P17031 533 aaPredicted RBP12.21□□□□□ -0.45
RNF40-212ENST00000602784 GSTM3P21266 225 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 RPL4P36578 427 aaKnown RBP12.21□□□□□ -0.45
RNF40-212ENST00000602784 CTXN1P60606 82 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 RPL27P61353 136 aaKnown RBP12.21□□□□□ -0.45
RNF40-212ENST00000602784 ROR2Q01974 943 aaKnown RBP12.21□□□□□ -0.45
RNF40-212ENST00000602784 LGALS3BPQ08380 585 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 CAMK2DQ13557 499 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 SNTB1Q13884 538 aaKnown RBP12.21□□□□□ -0.45
RNF40-212ENST00000602784 KPNB1Q14974 876 aaKnown RBP12.21□□□□□ -0.45
RNF40-212ENST00000602784 ATP6AP1Q15904 470 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 GABRA6Q16445 453 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 HIST3H3Q16695 136 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 TIMM23BQ5SRD1 257 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 HMBOX1Q6NT76 420 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 ZFP1Q6P2D0 407 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 SMARCD3Q6STE5 483 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 CD300LDQ6UXZ3 194 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 DPY19L2P2Q6ZN68 376 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 LINGO2Q7L985 606 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 WDFY1Q8IWB7 410 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 C17orf78Q8N4C9 275 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 GIPC3Q8TF64 312 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 TMEM54Q969K7 222 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 MARVELD3Q96A59 401 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 S100PBPQ96BU1 408 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 NTN4Q9HB63 628 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 GPR35Q9HC97 309 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 ZNF226Q9NYT6 803 aa12.21□□□□□ -0.45
RNF40-212ENST00000602784 SETXQ7Z333 2677 aaKnown RBP12.21□□□□□ -0.46
RNF40-212ENST00000602784 CIB4A0PJX0 185 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 A6NIZ1 184 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 OR5H1A6NKK0 313 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 CASKO14936 926 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 AHCYL1O43865 530 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 E2F6O75461 281 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 TIPRLO75663 272 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 NR2C1P13056 603 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 APEHP13798 732 aaKnown RBP12.2□□□□□ -0.46
RNF40-212ENST00000602784 HOXB1P14653 301 aaPredicted RBP12.2□□□□□ -0.46
RNF40-212ENST00000602784 FASP25445 335 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 CSNK1A1P48729 337 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 ARHGDIAP52565 204 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 FOXG1P55316 489 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms