RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 CCDC124Q96CT7 223 aaKnown RBP10.09□□□□□ -0.79
VMP1-211ENST00000591315 SLC7A6OSQ96CW6 309 aaPredicted RBP10.09□□□□□ -0.79
VMP1-211ENST00000591315 BPIFA2Q96DR5 249 aa10.09□□□□□ -0.79
VMP1-211ENST00000591315 TNFRSF13CQ96RJ3 184 aa10.09□□□□□ -0.79
VMP1-211ENST00000591315 SEPHS2Q99611 448 aa10.09□□□□□ -0.79
VMP1-211ENST00000591315 GPA33Q99795 319 aa10.09□□□□□ -0.79
VMP1-211ENST00000591315 TMEM204Q9BSN7 226 aa10.09□□□□□ -0.79
VMP1-211ENST00000591315 THTPAQ9BU02 230 aa10.09□□□□□ -0.79
VMP1-211ENST00000591315 LINC00470Q9BZP3 86 aa10.09□□□□□ -0.79
VMP1-211ENST00000591315 CRLF2Q9HC73 371 aa10.09□□□□□ -0.79
VMP1-211ENST00000591315 NDE1Q9NXR1 346 aa10.09□□□□□ -0.79
VMP1-211ENST00000591315 ZNF726A6NNF4 738 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 ATE1O95260 518 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 TSPAN19P0C672 248 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 RHCEP18577 417 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 FGD3Q5JSP0 725 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 HMBOX1Q6NT76 420 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 ADAM5Q6NVV9 412 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 LRFN4Q6PJG9 635 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 MBOAT2Q6ZWT7 520 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 CYP4Z1Q86W10 505 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 ANKK1Q8NFD2 765 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 LIPHQ8WWY8 451 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 MUCL1Q96DR8 90 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 FAM46AQ96IP4 442 aaKnown RBP10.08□□□□□ -0.8
VMP1-211ENST00000591315 DHRS1Q96LJ7 313 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 FUZQ9BT04 418 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 SEC61A2Q9H9S3 476 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 ACTR3BQ9P1U1 418 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 VPS13CQ709C8 3753 aa10.08□□□□□ -0.8
VMP1-211ENST00000591315 MTORP42345 2549 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 FLNAP21333 2647 aaKnown RBP10.07□□□□□ -0.8
VMP1-211ENST00000591315 EFCAB9A8MZ26 197 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 RPL36A-HNRNPH2H7BZ11 118 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 M0R1B8 84 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 SAGP10523 405 aaPredicted RBP10.07□□□□□ -0.8
VMP1-211ENST00000591315 CD53P19397 219 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 IFNA8P32881 189 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 CSNK1A1P48729 337 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 ERFP50548 548 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 MYBPC1Q00872 1141 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 SPIBQ01892 262 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 PPP1R8Q12972 351 aaKnown RBP10.07□□□□□ -0.8
VMP1-211ENST00000591315 TOP3AQ13472 1001 aaPredicted RBP10.07□□□□□ -0.8
VMP1-211ENST00000591315 TRIM25Q14258 630 aaKnown RBP10.07□□□□□ -0.8
VMP1-211ENST00000591315 ACKR1Q16570 336 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 OR7E24Q6IFN5 339 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 LCN8Q6JVE9 175 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 MYPOPQ86VE0 399 aaPredicted RBP10.07□□□□□ -0.8
VMP1-211ENST00000591315 P2RY8Q86VZ1 359 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 DHFR2Q86XF0 187 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 CLDN22Q8N7P3 220 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 LRRC75AQ8NAA5 344 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 SYT14Q8NB59 555 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 C1orf162Q8NEQ5 155 aaPredicted RBP10.07□□□□□ -0.8
VMP1-211ENST00000591315 OR6N1Q8NGY5 312 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 OR6X1Q8NH79 312 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 ASB10Q8WXI3 467 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 AKAP1Q92667 903 aaKnown RBP eCLIP10.07□□□□□ -0.8
VMP1-211ENST00000591315 TMEM54Q969K7 222 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 ZNF347Q96SE7 839 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 PIP5K1AQ99755 562 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 NOX3Q9HBY0 568 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 INIPQ9NRY2 104 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 VNN3Q9NY84 501 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 PRPF19Q9UMS4 504 aaKnown RBP10.07□□□□□ -0.8
VMP1-211ENST00000591315 HIF3AQ9Y2N7 669 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 FAM32AQ9Y421 112 aaKnown RBP10.07□□□□□ -0.8
VMP1-211ENST00000591315 RNF115Q9Y4L5 304 aa10.07□□□□□ -0.8
VMP1-211ENST00000591315 MED13LQ71F56 2210 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 IGKV1D-43A0A0B4J1Z2 117 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 A0A1W2PRQ8 180 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 OR6C65A6NJZ3 312 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 SHISA9B4DS77 424 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 ABCD4O14678 606 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 ACOT8O14734 319 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 AKAP8O43823 692 aaKnown RBP10.06□□□□□ -0.8
VMP1-211ENST00000591315 GOSR1O95249 250 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 BCL10O95999 233 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 IGF2P01344 180 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 FABP3P05413 133 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 CD3EP07766 207 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 CELA3BP08861 270 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 PATE4P0C8F1 98 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 PGA4P0DJD7 388 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 PGA3P0DJD8 388 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 CD40P25942 277 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 OMPP47874 163 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 PRPS1P60891 318 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 RPS4XP62701 263 aaKnown RBP10.06□□□□□ -0.8
VMP1-211ENST00000591315 TGFBR3Q03167 851 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 BNIP1Q12981 228 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 DGCR6Q14129 220 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 TESK1Q15569 626 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 SPATS1Q496A3 300 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 ARMC4Q5T2S8 1044 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 PGM2L1Q6PCE3 622 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 KLHL24Q6TFL4 600 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 B3GLCTQ6Y288 498 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 ZDHHC21Q8IVQ6 265 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms