RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 HTR1AP08908 422 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 IFNGR1P15260 489 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 ENPP1P22413 925 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 SLC15A1P46059 708 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 SLC16A1P53985 500 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 RAP1BP61224 184 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 RPS7P62081 194 aaKnown RBP19.91■□□□□ 0.78
ATG4D-209ENST00000588857 RAP1AP62834 184 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 BCL2A1Q16548 175 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 ASB18Q6ZVZ8 466 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 RBMXL3Q8N7X1 1067 aaKnown RBP19.91■□□□□ 0.78
ATG4D-209ENST00000588857 ZNF519Q8TB69 540 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 RNFT2Q96EX2 444 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 SRXN1Q9BYN0 137 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 B3GAT1Q9P2W7 334 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 LIPGQ9Y5X9 500 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 ALPK2Q86TB3 2170 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 LOC102725191A0A1B0GVB3 256 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 TRIM64CA6NLI5 447 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 CDK1P06493 297 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 ZNF708P17019 499 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 ZNF43P17038 809 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 CLDN15P56746 228 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 CLDN18P56856 261 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 SRYQ05066 204 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 LGALS3BPQ08380 585 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 FAM205BPQ63HN1 556 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 PRSS48Q7RTY5 328 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 SPARTQ8N0X7 666 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 OR9Q1Q8NGQ5 310 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 VCX3AQ9NNX9 186 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 WARS2Q9UGM6 360 aaKnown RBP19.9■□□□□ 0.78
ATG4D-209ENST00000588857 TP53TG5Q9Y2B4 290 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 ATMQ13315 3056 aa19.9■□□□□ 0.78
ATG4D-209ENST00000588857 IGHV3-15A0A0B4J1V0 119 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 SLC22A31A6NKX4 558 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 STSP08842 583 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 KLK2P20151 261 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 NR1H2P55055 460 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 RPS3AP61247 264 aaKnown RBP19.89■□□□□ 0.77
ATG4D-209ENST00000588857 RAB40BQ12829 278 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 TMED1Q13445 227 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 LY6DQ14210 128 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 MELKQ14680 651 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 ARMC4Q5T2S8 1044 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 VASNQ6EMK4 673 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 ASB10Q8WXI3 467 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 CPNE4Q96A23 557 aaPredicted RBP19.89■□□□□ 0.77
ATG4D-209ENST00000588857 UCN2Q96RP3 112 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 DDOQ99489 341 aa19.89■□□□□ 0.77
ATG4D-209ENST00000588857 RPRD1BQ9NQG5 326 aaKnown RBP19.89■□□□□ 0.77
ATG4D-209ENST00000588857 RAMP1O60894 148 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 MT-ND2P03891 347 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 GYPBP06028 91 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 CLUP10909 449 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 ATP6V1E1P36543 226 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 SLC25A1P53007 311 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 KCTD8Q6ZWB6 473 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 HDDC2Q7Z4H3 204 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 SVOPQ8N4V2 548 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 ZPLD1Q8TCW7 415 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 TMEM80Q96HE8 168 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 TEAD3Q99594 435 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 ARHGAP9Q9BRR9 750 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 NMNAT2Q9BZQ4 307 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 TSPAN10Q9H1Z9 355 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-209ENST00000588857 MRPS18AQ9NVS2 196 aaKnown RBP19.88■□□□□ 0.77
ATG4D-209ENST00000588857 MED29Q9NX70 200 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 PAQR5Q9NXK6 330 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-209ENST00000588857 KLHL13Q9P2N7 655 aa19.88■□□□□ 0.77
ATG4D-209ENST00000588857 PRSS37A4D1T9 235 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 H7C1C5 153 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 SMAD9O15198 467 aaKnown RBP19.87■□□□□ 0.77
ATG4D-209ENST00000588857 IGHG3P01860 377 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 PRB1P04280 392 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 SLC2A5P22732 501 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 RPL5P46777 297 aaKnown RBP19.87■□□□□ 0.77
ATG4D-209ENST00000588857 BIDP55957 195 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 LCN6P62502 163 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 PON3Q15166 354 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 GTF2IRD2BQ6EKJ0 949 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 RPUSD3Q6P087 351 aaKnown RBP19.87■□□□□ 0.77
ATG4D-209ENST00000588857 GTF2IRD2Q86UP8 949 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 EXD3Q8N9H8 876 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 LGALS12Q96DT0 336 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 TXNDC15Q96J42 360 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 SNX18Q96RF0 628 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 BATF3Q9NR55 127 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 ASB6Q9NWX5 421 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 COMMD3-BMI1R4GMX3 469 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 NPIPA2E9PIF3 369 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 NPIPA3F8WFD2 350 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 TRAF3IP2O43734 574 aaPredicted RBP19.87■□□□□ 0.77
ATG4D-209ENST00000588857 FADS2O95864 444 aaKnown RBP19.87■□□□□ 0.77
ATG4D-209ENST00000588857 TFAP2AP05549 437 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 SPI1P17947 270 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 C21orf33P30042 268 aaPredicted RBP19.87■□□□□ 0.77
ATG4D-209ENST00000588857 POU4F3Q15319 338 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 INAQ16352 499 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 LCN1P1Q5VSP4 162 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms