RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 GASTP01350 101 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 IGHV3-9P01782 118 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 CD14P08571 375 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 CTXN1P60606 82 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 FAM27E3Q08E93 113 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 COX10Q12887 443 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 ITGADQ13349 1161 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 CD300LDQ6UXZ3 194 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 ZNF620Q6ZNG0 422 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 CXorf67Q86X51 503 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-204ENST00000586558 C20orf196Q8IYI0 205 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 GPR137CQ8N3F9 429 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 STEAP2Q8NFT2 490 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 ASB10Q8WXI3 467 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 KISS1RQ969F8 398 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-204ENST00000586558 CENPNQ96H22 339 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-204ENST00000586558 FEVQ99581 238 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 EMC6Q9BV81 110 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 B3GAT2Q9NPZ5 323 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 TAS2R16Q9NYV7 291 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 PDP1Q9P0J1 537 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-204ENST00000586558 ANKHD1Q8IWZ3 2542 aaKnown RBP16.91■□□□□ 0.3
DDX39A-204ENST00000586558 ERICH4A6NGS2 130 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 PDLIM1O00151 329 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 IGHG1P01857 330 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 PPP3CBP16298 524 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 ZNF26P17031 533 aaPredicted RBP16.9■□□□□ 0.3
DDX39A-204ENST00000586558 MPGP29372 298 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 SLC6A6P31641 620 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 RPL27P61353 136 aaKnown RBP16.9■□□□□ 0.3
DDX39A-204ENST00000586558 TGFBR3Q03167 851 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 FAPQ12884 760 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 ARMC4Q5T2S8 1044 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 SFRP5Q5T4F7 317 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 DPY19L2P2Q6ZN68 376 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 RASSF6Q6ZTQ3 369 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 TMEM179BQ7Z7N9 219 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 HIPK1Q86Z02 1210 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 DMRTC2Q8IXT2 367 aaPredicted RBP16.9■□□□□ 0.3
DDX39A-204ENST00000586558 CLDN22Q8N7P3 220 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 OR5K1Q8NHB7 308 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 DNAJC9Q8WXX5 260 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 LRTOMTQ8WZ04 291 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 ZNF566Q969W8 418 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 KATNB1Q9BVA0 655 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 POLDIP3Q9BY77 421 aaKnown RBP16.9■□□□□ 0.3
DDX39A-204ENST00000586558 OR52D1Q9H346 318 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 ZNF556Q9HAH1 456 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 CDH10Q9Y6N8 788 aa16.9■□□□□ 0.3
DDX39A-204ENST00000586558 ICE1Q9Y2F5 2266 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 A6NIZ1 184 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 H3BNX3 289 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 RPL36A-HNRNPH2H7BZ11 118 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 NR2C1P13056 603 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 APEHP13798 732 aaKnown RBP16.89■□□□□ 0.29
DDX39A-204ENST00000586558 ANXA8P13928 327 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 IGHV1-2P23083 117 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 IL32P24001 234 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 CCKARP32238 428 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 CSNK1A1P48729 337 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 SH3BGRP55822 239 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-204ENST00000586558 FXYD6P3P58550 94 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 RAP1BP61224 184 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 RAP1AP62834 184 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 TOP3AQ13472 1001 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-204ENST00000586558 CAMK2DQ13557 499 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 MELKQ14680 651 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 RFX4Q33E94 735 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 CARD17Q5XLA6 110 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 GPR139Q6DWJ6 353 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 THSD4Q6ZMP0 1018 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 MEX3BQ6ZN04 569 aaKnown RBP16.89■□□□□ 0.29
DDX39A-204ENST00000586558 IGFN1Q86VF2 1251 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 ZDHHC13Q8IUH4 622 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 SVOPLQ8N434 492 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 ZNF433Q8N7K0 673 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-204ENST00000586558 ARIH2OSQ8N7S6 290 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 OR6N1Q8NGY5 312 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 STMN2Q93045 179 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 GTPBP3Q969Y2 492 aaKnown RBP16.89■□□□□ 0.29
DDX39A-204ENST00000586558 ALKBH3Q96Q83 286 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-204ENST00000586558 NRIP3Q9NQ35 241 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 GRHPRQ9UBQ7 328 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 NDRG3Q9UGV2 375 aa16.89■□□□□ 0.29
DDX39A-204ENST00000586558 UTP20O75691 2785 aaKnown RBP16.88■□□□□ 0.29
DDX39A-204ENST00000586558 TUBAL3A6NHL2 446 aa16.88■□□□□ 0.29
DDX39A-204ENST00000586558 UPK3AO75631 287 aa16.88■□□□□ 0.29
DDX39A-204ENST00000586558 PGA4P0DJD7 388 aa16.88■□□□□ 0.29
DDX39A-204ENST00000586558 PGA3P0DJD8 388 aa16.88■□□□□ 0.29
DDX39A-204ENST00000586558 ACADSP16219 412 aa16.88■□□□□ 0.29
DDX39A-204ENST00000586558 STK11Q15831 433 aa16.88■□□□□ 0.29
DDX39A-204ENST00000586558 C1QTNF12Q5T7M4 302 aa16.88■□□□□ 0.29
DDX39A-204ENST00000586558 SP5Q6BEB4 398 aaPredicted RBP16.88■□□□□ 0.29
DDX39A-204ENST00000586558 OR7E24Q6IFN5 339 aa16.88■□□□□ 0.29
DDX39A-204ENST00000586558 HMBOX1Q6NT76 420 aa16.88■□□□□ 0.29
DDX39A-204ENST00000586558 BHLHA15Q7RTS1 189 aaPredicted RBP16.88■□□□□ 0.29
DDX39A-204ENST00000586558 SSX8Q7RTT4 187 aa16.88■□□□□ 0.29
DDX39A-204ENST00000586558 AMIGO2Q86SJ2 522 aa16.88■□□□□ 0.29
DDX39A-204ENST00000586558 C1orf162Q8NEQ5 155 aaPredicted RBP16.88■□□□□ 0.29
DDX39A-204ENST00000586558 NOXO1Q8NFA2 376 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms