RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 CD79BP40259 229 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 NOVA1P51513 510 aaKnown RBP18.28■□□□□ 0.52
SMG8-203ENST00000578922 ZNF41P51814 821 aaPredicted RBP18.28■□□□□ 0.52
SMG8-203ENST00000578922 RPS4XP62701 263 aaKnown RBP18.28■□□□□ 0.52
SMG8-203ENST00000578922 FOXK1P85037 733 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 TIGD3Q6B0B8 471 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 MDGA2Q7Z553 956 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 SDR9C7Q8NEX9 313 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 OR52E2Q8NGJ4 325 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 OR5M1Q8NGP8 315 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 IRF2BPLQ9H1B7 796 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 OR51V1Q9H2C8 321 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 SLA2Q9H6Q3 261 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 MARCH7Q9H992 704 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 TNFRSF10DQ9UBN6 386 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 KLHL21Q9UJP4 597 aa18.28■□□□□ 0.52
SMG8-203ENST00000578922 TRAV36DV7A0A075B6V5 113 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 F10P00742 488 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 SERPINA7P05543 415 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 ASAH2BP0C7U1 165 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 CLUP10909 449 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 HIST1H1CP16403 213 aaKnown RBP18.27■□□□□ 0.52
SMG8-203ENST00000578922 HK1P19367 917 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 APEX1P27695 318 aaKnown RBP18.27■□□□□ 0.52
SMG8-203ENST00000578922 ATP6V1E1P36543 226 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 SLC16A1P53985 500 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 SUMO3P55854 103 aaPredicted RBP18.27■□□□□ 0.52
SMG8-203ENST00000578922 ZNF322Q6U7Q0 402 aaPredicted RBP18.27■□□□□ 0.52
SMG8-203ENST00000578922 ZFP41Q8N8Y5 198 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 WDSUB1Q8N9V3 476 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 THOC3Q96J01 351 aaKnown RBP18.27■□□□□ 0.52
SMG8-203ENST00000578922 RNF170Q96K19 258 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 SECISBP2Q96T21 854 aaKnown RBP18.27■□□□□ 0.52
SMG8-203ENST00000578922 TMED9Q9BVK6 235 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 KCNN2Q9H2S1 579 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 FN3KQ9H479 309 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 CHRNA9Q9UGM1 479 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 ASPMQ8IZT6 3477 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 CPAMD8Q8IZJ3 1885 aa18.27■□□□□ 0.52
SMG8-203ENST00000578922 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 A8MVM7 634 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 FAM25AB3EWG3 89 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 FAM25CB3EWG5 89 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 FAM25GB3EWG6 89 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 PRR23D1E9PI22 279 aaPredicted RBP18.27■□□□□ 0.51
SMG8-203ENST00000578922 HPGDSO60760 199 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 HIST1H2ABP04908 130 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 GYPBP06028 91 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 PRR23D2P0DMB1 279 aaPredicted RBP18.27■□□□□ 0.51
SMG8-203ENST00000578922 IL11P20809 199 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 C1orf140Q5VVS0 124 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 HIST3H2AQ7L7L0 130 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 NANOGNBQ7Z5D8 188 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 LIX1LQ8IVB5 337 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 TCTE3Q8IZS6 198 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 FAM98AQ8NCA5 519 aaKnown RBP18.27■□□□□ 0.51
SMG8-203ENST00000578922 OR2M3Q8NG83 312 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 OR4K17Q8NGC6 315 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 SPRYD4Q8WW59 207 aaPredicted RBP18.27■□□□□ 0.51
SMG8-203ENST00000578922 ST8SIA1Q92185 356 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 HIST1H2ACQ93077 130 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 PTP4A1Q93096 173 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 RASD2Q96D21 266 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 DMRTB1Q96MA1 342 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 JSRP1Q96MG2 331 aaPredicted RBP18.27■□□□□ 0.51
SMG8-203ENST00000578922 PTDSS2Q9BVG9 487 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 NUFIP1Q9UHK0 495 aaKnown RBP18.27■□□□□ 0.51
SMG8-203ENST00000578922 BAIAP2Q9UQB8 552 aa18.27■□□□□ 0.51
SMG8-203ENST00000578922 CNTRLQ7Z7A1 2325 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 FAM186AA6NE01 2351 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 CEP250Q9BV73 2442 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 J3QRE1 110 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 LRRTM2O43300 516 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 BGLAPP02818 100 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 OPN1LWP04000 364 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 CAV3P56539 151 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 RPS7P62081 194 aaKnown RBP18.26■□□□□ 0.51
SMG8-203ENST00000578922 CHAF1BQ13112 559 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 ALG10Q5BKT4 473 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 ARHGAP11AQ6P4F7 1023 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 DPY19L2P2Q6ZN68 376 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 SLC37A3Q8NCC5 494 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 HDHD5Q9BXW7 423 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 HIF3AQ9Y2N7 669 aa18.26■□□□□ 0.51
SMG8-203ENST00000578922 PTPRZ1P23471 2315 aaPredicted RBP18.26■□□□□ 0.51
SMG8-203ENST00000578922 A8MV72 311 aaPredicted RBP18.25■□□□□ 0.51
SMG8-203ENST00000578922 IMPA2O14732 288 aa18.25■□□□□ 0.51
SMG8-203ENST00000578922 IGF2P01344 180 aa18.25■□□□□ 0.51
SMG8-203ENST00000578922 ZNF3P17036 446 aa18.25■□□□□ 0.51
SMG8-203ENST00000578922 CD53P19397 219 aa18.25■□□□□ 0.51
SMG8-203ENST00000578922 PRPS1P60891 318 aa18.25■□□□□ 0.51
SMG8-203ENST00000578922 RPL18Q07020 188 aaKnown RBP18.25■□□□□ 0.51
SMG8-203ENST00000578922 ACER2Q5QJU3 275 aa18.25■□□□□ 0.51
SMG8-203ENST00000578922 ATP1A1-AS1Q5TC04 95 aa18.25■□□□□ 0.51
SMG8-203ENST00000578922 SLC22A10Q63ZE4 541 aa18.25■□□□□ 0.51
SMG8-203ENST00000578922 NIPAL3Q6P499 406 aa18.25■□□□□ 0.51
SMG8-203ENST00000578922 KCNJ15Q99712 375 aa18.25■□□□□ 0.51
SMG8-203ENST00000578922 TRAF4Q9BUZ4 470 aaPredicted RBP18.25■□□□□ 0.51
SMG8-203ENST00000578922 A0A0B4J293 547 aa18.25■□□□□ 0.51
SMG8-203ENST00000578922 SMIM30A4D0T7 59 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms