RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	AP3S2	P59780	193 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	CTXN1	P60606	82 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	RPL6	Q02878	288 aa	Known RBP	11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	SNTA1	Q13424	505 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	EXOSC2	Q13868	293 aa	Known RBP	11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	ALG10	Q5BKT4	473 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	TOR2A	Q5JU69	321 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	OLFML2A	Q68BL7	652 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	DNM1P46	Q6ZS02	220 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	MED25	Q71SY5	747 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	LRRTM1	Q86UE6	522 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	CDC20B	Q86Y33	519 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	DND1	Q8IYX4	353 aa	Known RBP	11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	OR2T4	Q8NH00	348 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	MIB2	Q96AX9	1013 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	ZNF578	Q96N58	590 aa	Predicted RBP	11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	KLHDC3	Q9BQ90	382 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	MRI1	Q9BV20	369 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507		A0A1B0GTH9	108 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	BLACE	A4D250	179 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	ARPC1B	O15143	372 aa	Known RBP	11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	SHOX	O15266	292 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	TOX	O94900	526 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	F13B	P05160	661 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	TACSTD2	P09758	323 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	SRF	P11831	508 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	CSRP1	P21291	193 aa	Known RBP	11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	RAD52	P43351	418 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	RGS19	P49795	217 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	AP2S1	P53680	142 aa	Predicted RBP	11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	PUDP	Q08623	228 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	TDG	Q13569	410 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	TMEM69	Q5SWH9	247 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	FAAP20	Q6NZ36	180 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	JAZF1	Q86VZ6	243 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	OR5AK2	Q8NH90	309 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	C1orf216	Q8TAB5	229 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	RBP7	Q96R05	134 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	LPAR4	Q99677	370 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	GPR27	Q9NS67	375 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	CFD	P00746	253 aa	Predicted RBP	11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	DCTD	P32321	178 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	BLVRA	P53004	296 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	EPHA4	P54764	986 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	LINC00303	Q3SY05	128 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	MEST	Q5EB52	335 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	METTL11B	Q5VVY1	283 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	DNAAF1	Q8NEP3	725 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	ZDHHC1	Q8WTX9	485 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	PIGK	Q92643	395 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	CCDC74A	Q96AQ1	378 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	ADAD1	Q96M93	576 aa	Known RBP	11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	UTP23	Q9BRU9	249 aa	Known RBP	11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	CDCP1	Q9H5V8	836 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	NOX3	Q9HBY0	568 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	TCF7L1	Q9HCS4	588 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	SRA1	Q9HD15	236 aa	Known RBP	11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	GLTP	Q9NZD2	209 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	PIPOX	Q9P0Z9	390 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	PCDHGA5	Q9Y5G8	931 aa		11.95	□□□□□ -0.5
SCAPER-215	ENST00000565507	BDP1	A6H8Y1	2624 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	OR4C45	A6NMZ5	311 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	THEGL	P0DJG4	465 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	SOX2	P48431	317 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	ART1	P52961	327 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	HSD17B7	P56937	341 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	MRPS10	P82664	201 aa	Known RBP	11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	DMWD	Q09019	674 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	PLA2G7	Q13093	441 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	OR6V1	Q8N148	313 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	C10orf53	Q8N6V4	93 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	NSMAF	Q92636	917 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	ZNF285	Q96NJ3	590 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	MAP3K3	Q99759	626 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	SEC22C	Q9BRL7	303 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	UBQLN4	Q9NRR5	601 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	SLC6A5	Q9Y345	797 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	TP53BP1	Q12888	1972 aa	Predicted RBP	11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	TRAV8-7	A0A075B6U6	113 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507		H7C1C5	153 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	ACOT7	O00154	380 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	KHDRBS3	O75525	346 aa	Known RBP	11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	UBL4A	P11441	157 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	MAPK3	P27361	379 aa	Predicted RBP	11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	LCN1	P31025	176 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	GABRA4	P48169	554 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	MECP2	P51608	486 aa	Known RBP	11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	TAS2R20	P59543	309 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	LCN6	P62502	163 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	SKP1	P63208	163 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	RPL18	Q07020	188 aa	Known RBP	11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	POU4F3	Q15319	338 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	FAM220A	Q7Z4H9	259 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	METTL27	Q8N6F8	245 aa	Predicted RBP	11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	ZNF321P	Q8N8H1	164 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	OR10AC1	Q8NH08	325 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	ADAMTS18	Q8TE60	1221 aa		11.94	□□□□□ -0.5
SCAPER-215	ENST00000565507	KTI12	Q96EK9	354 aa	Predicted RBP	11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms