RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 MUC13Q9H3R2 512 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 GPR35Q9HC97 309 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 SLC17A5Q9NRA2 495 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 HIF3AQ9Y2N7 669 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 TRAV27A0A087WT01 109 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 CIB4A0PJX0 185 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 SH3PXD2BA1X283 911 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 ZNF503-AS2A6NEH8 195 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 OR6C65A6NJZ3 312 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 ZNF587BE7ETH6 402 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 M0R3G1 203 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 GYG2O15488 501 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 GSC2O15499 205 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 RNF13O43567 381 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 PTP4A3O75365 173 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 OR6A2O95222 327 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 FABP3P05413 133 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 PGA4P0DJD7 388 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 PGA3P0DJD8 388 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 ITGA2P17301 1181 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 IFNA8P32881 189 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 GPR4P46093 362 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 HMGA2P52926 109 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 FXYD6P3P58550 94 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 ARF1P84077 181 aaKnown RBP7.48□□□□□ -1.21
UBR1-204ENST00000563239 TRAP1Q12931 704 aaKnown RBP7.48□□□□□ -1.21
UBR1-204ENST00000563239 MELKQ14680 651 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 ACKR1Q16570 336 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 HIST3H3Q16695 136 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 CEACAM16Q2WEN9 425 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 TBRG1Q3YBR2 411 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 DNAL1Q4LDG9 190 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 BEX5Q5H9J7 111 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 MTX3Q5HYI7 312 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 NCMAPQ5T1S8 102 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 ARMC4Q5T2S8 1044 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 OR7E24Q6IFN5 339 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 ALKBH2Q6NS38 261 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 LRFN4Q6PJG9 635 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 ZER1Q7Z7L7 766 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 ZDHHC21Q8IVQ6 265 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 ADGRG5Q8IZF4 528 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 C17orf78Q8N4C9 275 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 OR13C2Q8NGS9 318 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 OR52N5Q8NH56 324 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 OR52J3Q8NH60 311 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 ASB10Q8WXI3 467 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 CCDC124Q96CT7 223 aaKnown RBP7.48□□□□□ -1.21
UBR1-204ENST00000563239 NMD3Q96D46 503 aaKnown RBP7.48□□□□□ -1.21
UBR1-204ENST00000563239 FAM46AQ96IP4 442 aaKnown RBP7.48□□□□□ -1.21
UBR1-204ENST00000563239 MRPL13Q9BYD1 178 aaKnown RBP7.48□□□□□ -1.21
UBR1-204ENST00000563239 CRLF2Q9HC73 371 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 INIPQ9NRY2 104 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 VNN3Q9NY84 501 aa7.48□□□□□ -1.21
UBR1-204ENST00000563239 FAM32AQ9Y421 112 aaKnown RBP7.48□□□□□ -1.21
UBR1-204ENST00000563239 RAI1Q7Z5J4 1906 aaPredicted RBP7.47□□□□□ -1.21
UBR1-204ENST00000563239 A0A096LPE4 126 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 A0A1W2PPZ6 126 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 NPIPB13A6NJU9 1138 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 ZNF726A6NNF4 738 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 EFCAB9A8MZ26 197 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 NPIPB4C9JG80 1138 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 CLOCKO15516 846 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 AKAP8O43823 692 aaKnown RBP7.47□□□□□ -1.21
UBR1-204ENST00000563239 DNAJC8O75937 253 aaPredicted RBP7.47□□□□□ -1.21
UBR1-204ENST00000563239 KRT33AO76009 404 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 ATE1O95260 518 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 IGHMP01871 453 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 CDH2P19022 906 aaPredicted RBP7.47□□□□□ -1.21
UBR1-204ENST00000563239 RRM2P31350 389 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 SLC9A3P48764 834 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 SPIBQ01892 262 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 TGFBR3Q03167 851 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 BSPH1Q075Z2 132 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 ALG10Q5BKT4 473 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 FGD3Q5JSP0 725 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 HMBOX1Q6NT76 420 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 ANKRD16Q6P6B7 361 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 ZNF627Q7L945 461 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 ABHD12BQ7Z5M8 362 aaPredicted RBP7.47□□□□□ -1.21
UBR1-204ENST00000563239 OAFQ86UD1 273 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 CDH24Q86UP0 819 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 IGFN1Q86VF2 1251 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 GPR137CQ8N3F9 429 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 OR4K5Q8NGD3 323 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 OR4C15Q8NGM1 316 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 OR51A7Q8NH64 312 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 MAGEE2Q8TD90 523 aaPredicted RBP7.47□□□□□ -1.21
UBR1-204ENST00000563239 IGFBPL1Q8WX77 278 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 NEUROG1Q92886 237 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 MCUR1Q96AQ8 359 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 SLC25A44Q96H78 314 aaPredicted RBP7.47□□□□□ -1.21
UBR1-204ENST00000563239 ADAD1Q96M93 576 aaKnown RBP7.47□□□□□ -1.21
UBR1-204ENST00000563239 ZNF347Q96SE7 839 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 C1QTNF6Q9BXI9 259 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 MAGIXQ9H6Y5 334 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 GLTPQ9NZD2 209 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 SLC7A8Q9UHI5 535 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 ST6GALNAC2Q9UJ37 374 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 ZNF346Q9UL40 294 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms