RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 GYG2O15488 501 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 CLOCKO15516 846 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 KRT33AO76009 404 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 IGF2P01344 180 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 HIST1H2ABP04908 130 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 FABP3P05413 133 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 OMPP47874 163 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 LIMS1P48059 325 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 ZNF83P51522 516 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 RPS4XP62701 263 aaKnown RBP10.82□□□□□ -0.68
SYNE2-214ENST00000554928 ARF1P84077 181 aaKnown RBP10.82□□□□□ -0.68
SYNE2-214ENST00000554928 SPIBQ01892 262 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 SPOCK1Q08629 439 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 PPP1R8Q12972 351 aaKnown RBP10.82□□□□□ -0.68
SYNE2-214ENST00000554928 DGCR6Q14129 220 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 CEACAM16Q2WEN9 425 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 TBRG1Q3YBR2 411 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 BEX5Q5H9J7 111 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 HIST3H2AQ7L7L0 130 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 ZDHHC21Q8IVQ6 265 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 ARHGAP24Q8N264 748 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 GPR137CQ8N3F9 429 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 LILRB1Q8NHL6 650 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-214ENST00000554928 BCL2L2Q92843 193 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-214ENST00000554928 HIST1H2ACQ93077 130 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 BTBD10Q9BSF8 475 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 TMEM204Q9BSN7 226 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 CRLF2Q9HC73 371 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 IL1RAPQ9NPH3 570 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 SLC17A5Q9NRA2 495 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 PLEKHA6Q9Y2H5 1048 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 HIF3AQ9Y2N7 669 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 FAM32AQ9Y421 112 aaKnown RBP10.82□□□□□ -0.68
SYNE2-214ENST00000554928 SH3PXD2BA1X283 911 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 SAGP10523 405 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-214ENST00000554928 RRM2P31350 389 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 IFNA8P32881 189 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 MAGEA2P43356 314 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 FXYD6P3P58550 94 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 MYBPC1Q00872 1141 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 BSPH1Q075Z2 132 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 TOP3AQ13472 1001 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-214ENST00000554928 ACKR1Q16570 336 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 NCMAPQ5T1S8 102 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 HMBOX1Q6NT76 420 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 LRFN4Q6PJG9 635 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 ZNF704Q6ZNC4 412 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-214ENST00000554928 CLDN22Q8N7P3 220 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 C1orf162Q8NEQ5 155 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-214ENST00000554928 KBTBD8Q8NFY9 601 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 OR4K5Q8NGD3 323 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 OR6X1Q8NH79 312 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 ASB10Q8WXI3 467 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 TMEM54Q969K7 222 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 ASB9Q96DX5 294 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 ANKRD19PQ9H560 264 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 SEC61A2Q9H9S3 476 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 NOX3Q9HBY0 568 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 INIPQ9NRY2 104 aa10.81□□□□□ -0.68
SYNE2-214ENST00000554928 IGKV1D-43A0A0B4J1Z2 117 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 ZNF726A6NNF4 738 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 MCIDASD6RGH6 385 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 RPL36A-HNRNPH2H7BZ11 118 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 GSC2O15499 205 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 AKAP8O43823 692 aaKnown RBP10.8□□□□□ -0.68
SYNE2-214ENST00000554928 GADD45GO95257 159 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 BCL10O95999 233 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 PGA4P0DJD7 388 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 PGA3P0DJD8 388 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 CSNK1A1P48729 337 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 DNAL1Q4LDG9 190 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 ALG10Q5BKT4 473 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 ARMC4Q5T2S8 1044 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 ADAM5Q6NVV9 412 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 PAMR1Q6UXH9 720 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 TMPRSS11FQ6ZWK6 438 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 PIWIL3Q7Z3Z3 882 aaKnown RBP10.8□□□□□ -0.68
SYNE2-214ENST00000554928 ZER1Q7Z7L7 766 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 MYPOPQ86VE0 399 aaPredicted RBP10.8□□□□□ -0.68
SYNE2-214ENST00000554928 ADGRG5Q8IZF4 528 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 RNF113BQ8IZP6 322 aaKnown RBP10.8□□□□□ -0.68
SYNE2-214ENST00000554928 SYT14Q8NB59 555 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 OR6N1Q8NGY5 312 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 HDAC2Q92769 488 aaKnown RBP10.8□□□□□ -0.68
SYNE2-214ENST00000554928 MCUR1Q96AQ8 359 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 TSPAN32Q96QS1 320 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 ZNF347Q96SE7 839 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 MUC13Q9H3R2 512 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 UBTD1Q9HAC8 227 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 CCM2LQ9NUG4 571 aaPredicted RBP10.8□□□□□ -0.68
SYNE2-214ENST00000554928 GLTPQ9NZD2 209 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 IL20RAQ9UHF4 553 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 ST6GALNAC2Q9UJ37 374 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 ITGB1BP2Q9UKP3 347 aa10.8□□□□□ -0.68
SYNE2-214ENST00000554928 ZNF346Q9UL40 294 aaKnown RBP10.8□□□□□ -0.68
SYNE2-214ENST00000554928 OR6C65A6NJZ3 312 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 M0R1B8 84 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 IMPA2O14732 288 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 PTP4A3O75365 173 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 TRMUO75648 421 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms