RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 NCOA6Q14686 2063 aaPredicted RBP5□□□□□ -1.61
SMARCC2-213ENST00000552627 TRGV11A0A075B6L2 103 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 IGLV3-32A0A0A0MS00 114 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 LOC105371267A0A1B0GV96 52 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 A0A1W2PPW3 197 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 A0A1W2PQD3 144 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 TCRBV3S1A0A5B6 114 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 WIPF3A6NGB9 483 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 GTPBP1O00178 669 aaKnown RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 F2RL2O00254 374 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 AP3D1O14617 1153 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ACOT8O14734 319 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 BCKDKO14874 412 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ZNF264O43296 627 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 NUDT14O95848 222 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 AGR2O95994 175 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 PTTG1O95997 202 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 AK1P00568 194 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 CSTAP01040 98 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 TRAPPC2P0DI81 140 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 TRAPPC2BP0DI82 140 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 PEPDP12955 493 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 SHC1P29353 583 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 AQP1P29972 269 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 RYKP34925 604 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 LHX2P50458 406 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 SUCLG1P53597 346 aaKnown RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 DSCR4P56555 118 aaPredicted RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 CLDN15P56746 228 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 CLDN18P56856 261 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 CLDN20P56880 219 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 GABARAPL2P60520 117 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 PMPCAQ10713 525 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 FOXF1Q12946 379 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 SELENBP1Q13228 472 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 SKP2Q13309 424 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ITGADQ13349 1161 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 FGFBP1Q14512 234 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 RGNQ15493 299 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ZNF141Q15928 474 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ZNF630Q2M218 657 aaPredicted RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 TMEM44Q2T9K0 475 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 PLPPR5Q32ZL2 321 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ACSF3Q4G176 576 aaPredicted RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 GCNT6Q5T4J0 391 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 REP15Q6BDI9 236 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ZNF836Q6ZNA1 936 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 IDO2Q6ZQW0 420 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ZBTB49Q6ZSB9 765 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 HDDC2Q7Z4H3 204 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 COMTD1Q86VU5 262 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 VRK2Q86Y07 508 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ARMC8Q8IUR7 673 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 GRAMD2AQ8IUY3 354 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 SLC7A5P1Q8MH63 180 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 GALNT4Q8N4A0 578 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ZNF527Q8NB42 609 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 NAXEQ8NCW5 288 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ATP6V1C2Q8NEY4 427 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 GIMAP1Q8WWP7 306 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 CNOT9Q92600 299 aaKnown RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 TMIGD2Q96BF3 282 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 SARAFQ96BY9 339 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 RCN3Q96D15 328 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 DNAJA3Q96EY1 480 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 WDYHV1Q96HA8 205 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 TMEM19Q96HH6 336 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ZNF845Q96IR2 970 aaPredicted RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 CEP19Q96LK0 163 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 RNF145Q96MT1 663 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 RDH12Q96NR8 316 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 TRNT1Q96Q11 434 aaKnown RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 TRIB1Q96RU8 372 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 PKP2Q99959 881 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 TREX2Q9BQ50 279 aaPredicted RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 AIFM2Q9BRQ8 373 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 DCUN1D5Q9BTE7 237 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 THUMPD3Q9BV44 507 aaKnown RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 RSPO3Q9BXY4 272 aaPredicted RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 TP63Q9H3D4 680 aaPredicted RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 SLA2Q9H6Q3 261 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 PTGES2Q9H7Z7 377 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 MED17Q9NVC6 651 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 RLIMQ9NVW2 624 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 P2RX2Q9UBL9 471 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ENPP5Q9UJA9 477 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 LEF1Q9UJU2 399 aaPredicted RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 ICAM5Q9UMF0 924 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 RABL2BQ9UNT1 228 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 USP22Q9UPT9 525 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 A3GALT2U3KPV4 340 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 COL12A1Q99715 3063 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 CENPEQ02224 2701 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 SPTBN1Q01082 2364 aaKnown RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 HEATR5AQ86XA9 2040 aa4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 PHF3Q92576 2039 aaKnown RBP4.99□□□□□ -1.61
SMARCC2-213ENST00000552627 PCNX1Q96RV3 2341 aa4.98□□□□□ -1.61
SMARCC2-213ENST00000552627 DSPPQ9NZW4 1301 aa4.98□□□□□ -1.61
SMARCC2-213ENST00000552627 ICE1Q9Y2F5 2266 aa4.98□□□□□ -1.61
SMARCC2-213ENST00000552627 NKX2-6A6NCS4 301 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms