RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 ELLP55199 621 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 RAB38P57729 211 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 RPS15P62841 145 aaKnown RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 KCNJ10P78508 379 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 TNFRSF17Q02223 184 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 C2orf80Q0P641 193 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 SF3B4Q15427 424 aaKnown RBP eCLIP3.32□□□□□ -1.884e-12■■■■■ 53.5
APAF1-208ENST00000549007 NSDHLQ15738 373 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 DEFB109BQ30KR1 87 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 PRMT9Q6P2P2 845 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ANKRD46Q86W74 232 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ZNF321PQ8N8H1 164 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ZNF248Q8NDW4 579 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 OR7A2PQ8NGA2 310 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 RAB3IL1Q8TBN0 382 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 CIDECQ96AQ7 238 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 KIAA1143Q96AT1 154 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 MAGED4Q96JG8 741 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 RILPQ96NA2 401 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ZNF317Q96PQ6 595 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 RASL10BQ96S79 203 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 MEAF6Q9HAF1 191 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 KCNK13Q9HB14 408 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 PRTFDC1Q9NRG1 225 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 PTGFRNQ9P2B2 879 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 SPTA1P02549 2419 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 MED13Q9UHV7 2174 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 A0A087X0K7 114 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ARGFXA6NJG6 315 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 TRIM64CA6NLI5 447 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 MLNRO43193 412 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 SNX3O60493 162 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 MYO1DO94832 1006 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 SEMA3DO95025 777 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 F10P00742 488 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 C1QCP02747 245 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 NCF2P19878 526 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 SRD5A2P31213 254 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 CDX1P47902 265 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 CNN1P51911 297 aaKnown RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 ZNF763Q0D2J5 394 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ACKR1Q16570 336 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 SPIN4Q56A73 249 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 SFT2D3Q587I9 215 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 EPGNQ6UW88 154 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 C16orf47Q6ZP98 133 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 IL17RELQ6ZVW7 336 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 PAGE2Q7Z2X7 111 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 CLEC4FQ8N1N0 589 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 KIF2BQ8N4N8 673 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ZNF383Q8NA42 475 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ANKRD9Q96BM1 317 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 LGALS12Q96DT0 336 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 CHMP6Q96FZ7 201 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 NEDD4LQ96PU5 975 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 CCNL2Q96S94 520 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 SHARPINQ9H0F6 387 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 RPF2Q9H7B2 306 aaKnown RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 ZNF160Q9HCG1 818 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 TCF7L2Q9NQB0 619 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 AHSPQ9NZD4 102 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 UBQLN2Q9UHD9 624 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 FBXL4Q9UKA2 621 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 STUB1Q9UNE7 303 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 A0A0U1RRA0 63 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 SCELO95171 688 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 AK1P00568 194 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 SLPIP03973 132 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ACAA1P09110 424 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 LAMP1P11279 417 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ZNF12P17014 697 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ZNF10P21506 573 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 IL12AP29459 219 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ARFIP1P53367 373 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 OR4D2P58180 307 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 NAA20P61599 178 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 PMP22Q01453 160 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 STX4Q12846 297 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ODF4Q2M2E3 257 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ZNF770Q6IQ21 691 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 RGS9BPQ6ZS82 235 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ANKRD37Q7Z713 158 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 FBXW8Q8N3Y1 598 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ZCCHC7Q8N3Z6 543 aaKnown RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 OR2Y1Q8NGV0 311 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 FBXO30Q8TB52 745 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 C11orf24Q96F05 449 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 CNRIP1Q96F85 164 aaPredicted RBP3.32□□□□□ -1.88
APAF1-208ENST00000549007 PPP3R2Q96LZ3 170 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 NMRK1Q9NWW6 199 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ARMCX1Q9P291 453 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 COPS7AQ9UBW8 275 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 CROCCQ5TZA2 2017 aa3.32□□□□□ -1.88
APAF1-208ENST00000549007 ITPR1Q14643 2758 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 VSTM2BA6NLU5 285 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 TRPC5OSA6NMA1 111 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 UBDO15205 165 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 RRP8O43159 456 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 PMS2P2O95744 297 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 CT62P0C5K7 136 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms