RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 BIVMQ86UB2 503 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 RNF113BQ8IZP6 322 aaKnown RBP13.35□□□□□ -0.27
SSH1-204ENST00000546697 LRRC17Q8N6Y2 441 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 RNF217Q8TC41 542 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 TMEM255BQ8WV15 326 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 SLC25A44Q96H78 314 aaPredicted RBP13.35□□□□□ -0.27
SSH1-204ENST00000546697 C20orf141Q9NUB4 165 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 HIF3AQ9Y2N7 669 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 H7C417 338 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 M0R1B8 84 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 DYNC1I1O14576 645 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 MGRN1O60291 552 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 PDE5AO76074 875 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 PGA4P0DJD7 388 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 PGA3P0DJD8 388 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 HSD17B1P14061 328 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 IFNGR1P15260 489 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 ARR3P36575 388 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 AGAP6Q5VW22 663 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 ALKBH2Q6NS38 261 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 SLC22A25Q6T423 547 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 DEF8Q6ZN54 512 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 SLC35D2Q76EJ3 337 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 VTCN1Q7Z7D3 282 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 DEPDC4Q8N2C3 294 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 IL17RDQ8NFM7 739 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 TRMT61AQ96FX7 289 aaKnown RBP13.34□□□□□ -0.27
SSH1-204ENST00000546697 PERPQ96FX8 193 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 BDH2Q9BUT1 245 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 EMC6Q9BV81 110 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 GORASP2Q9H8Y8 452 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 B3GAT2Q9NPZ5 323 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 CBLN4Q9NTU7 201 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 ZNF224Q9NZL3 707 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 CD300AQ9UGN4 299 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 ARL2BPQ9Y2Y0 163 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 MED31Q9Y3C7 131 aa13.34□□□□□ -0.27
SSH1-204ENST00000546697 ZNF503-AS2A6NEH8 195 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 IGHMP01871 453 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 IFNW1P05000 195 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 CECR9P0C854 216 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 FUT1P19526 365 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 APOBEC3AP31941 199 aaPredicted RBP13.33□□□□□ -0.28
SSH1-204ENST00000546697 UBE2NP61088 152 aaKnown RBP13.33□□□□□ -0.28
SSH1-204ENST00000546697 NAAAQ02083 359 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 RPL18Q07020 188 aaKnown RBP13.33□□□□□ -0.28
SSH1-204ENST00000546697 FHL1Q13642 323 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 TAF11Q15544 211 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 SWI5Q1ZZU3 235 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 IQCCQ4KMZ1 466 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 IFI44LQ53G44 452 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 ARMC4Q5T2S8 1044 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 PIWIL3Q7Z3Z3 882 aaKnown RBP13.33□□□□□ -0.28
SSH1-204ENST00000546697 NANOGNBQ7Z5D8 188 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
SSH1-204ENST00000546697 C10orf53Q8N6V4 93 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 NUP37Q8NFH4 326 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 PFN4Q8NHR9 129 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 NMD3Q96D46 503 aaKnown RBP13.33□□□□□ -0.28
SSH1-204ENST00000546697 SGTBQ96EQ0 304 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 DCAF13Q9NV06 445 aaKnown RBP13.33□□□□□ -0.28
SSH1-204ENST00000546697 FAM53CQ9NYF3 392 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 GLTPQ9NZD2 209 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 SNX13Q9Y5W8 968 aa13.33□□□□□ -0.28
SSH1-204ENST00000546697 ZNF726A6NNF4 738 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 FAM171A2A8MVW0 826 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 OR6A2O95222 327 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 SEMG1P04279 462 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 HIST1H2ABP04908 130 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 INHBBP09529 407 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 CDH2P19022 906 aaPredicted RBP13.32□□□□□ -0.28
SSH1-204ENST00000546697 PTNP21246 168 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 AHCYP23526 432 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 IFNA8P32881 189 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 CSNK1A1P48729 337 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 BIDP55957 195 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 ATP5J2P56134 94 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 GNGT1P63211 74 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 PRKCDQ05655 676 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 CAMK2DQ13557 499 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 TRAM2Q15035 370 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 MST1LQ2TV78 715 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 LRFN4Q6PJG9 635 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 HIST3H2AQ7L7L0 130 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 HDDC2Q7Z4H3 204 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 PGAM4Q8N0Y7 254 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 MUC15Q8N387 334 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 OR4F15Q8NGB8 312 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 ACOT11Q8WXI4 607 aaPredicted RBP13.32□□□□□ -0.28
SSH1-204ENST00000546697 HIST1H2ACQ93077 130 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 ZNF566Q969W8 418 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 TPD52L3Q96J77 140 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 HSH2DQ96JZ2 352 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 C7orf34Q96L11 122 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 DHRS1Q96LJ7 313 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 Q96MF0 132 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 LRRC37BQ96QE4 947 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 FOXB1Q99853 325 aa13.32□□□□□ -0.28
SSH1-204ENST00000546697 KCTD14Q9BQ13 255 aaPredicted RBP13.32□□□□□ -0.28
SSH1-204ENST00000546697 ULBP2Q9BZM5 246 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms