RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 FAM220AQ7Z4H9 259 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 MEIOBQ8N635 442 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 EXD3Q8N9H8 876 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 LRRC20Q8TCA0 184 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 THEM6Q8WUY1 208 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 OMA1Q96E52 524 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 MRPL48Q96GC5 212 aaKnown RBP14.36□□□□□ -0.11
LDLR-204ENST00000545707 OR1F2PQ96R84 312 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 AMELYQ99218 206 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 POMT2Q9UKY4 750 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 CTSEP14091 401 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 HPGDP15428 266 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 EFNB2P52799 333 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 YPEL5P62699 121 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 OR5M10Q6IEU7 315 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 GLDNQ6ZMI3 551 aaPredicted RBP14.36□□□□□ -0.11
LDLR-204ENST00000545707 ATG4DQ86TL0 474 aaPredicted RBP14.36□□□□□ -0.11
LDLR-204ENST00000545707 LRRTM1Q86UE6 522 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 ZNF615Q8N8J6 731 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 LRRC75AQ8NAA5 344 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 ZSCAN1Q8NBB4 408 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 UXS1Q8NBZ7 420 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 OR4D10Q8NGI6 311 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 PHYHIPQ92561 330 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 ATOH1Q92858 354 aaPredicted RBP14.36□□□□□ -0.11
LDLR-204ENST00000545707 ELMOD3Q96FG2 381 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 CMTM3Q96MX0 182 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 DHRS9Q9BPW9 319 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 RTN4RQ9BZR6 473 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 MMP25Q9NPA2 562 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 AKAP7Q9P0M2 348 aaPredicted RBP14.36□□□□□ -0.11
LDLR-204ENST00000545707 LAMP5Q9UJQ1 280 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 AUP1Q9Y679 476 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 A0A1B0GUH1 482 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 PYCARD-AS1I3L0S3 204 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 SEMA4FO95754 770 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 GABRG2P18507 467 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 AP3S2P59780 193 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 PSMA6P60900 246 aaKnown RBP14.35□□□□□ -0.11
LDLR-204ENST00000545707 RPL18Q07020 188 aaKnown RBP14.35□□□□□ -0.11
LDLR-204ENST00000545707 PRTGQ2VWP7 1150 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 MESTQ5EB52 335 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 C1QL3Q5VWW1 255 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 ZNF676Q8N7Q3 588 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 PPP1R14AQ96A00 147 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 TMEM106AQ96A25 262 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 MIB2Q96AX9 1013 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 SYT4Q9H2B2 425 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 EVA1AQ9H8M9 152 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 ZNF224Q9NZL3 707 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 GRHPRQ9UBQ7 328 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 HIF3AQ9Y2N7 669 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 ANXA2P2A6NMY6 339 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 CLDN4O14493 209 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 ABHD16AO95870 558 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 IGHV4-34P06331 123 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 ANXA2P07355 339 aaKnown RBP14.35□□□□□ -0.11
LDLR-204ENST00000545707 TACSTD2P09758 323 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 POU3F2P20265 443 aaPredicted RBP14.35□□□□□ -0.11
LDLR-204ENST00000545707 SDHAP31040 664 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 GUCA2AQ02747 115 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 IL10RAQ13651 578 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 OPCMLQ14982 345 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 CSRP2Q16527 193 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 C2orf68Q2NKX9 166 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 CLLU1Q5K131 121 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 WDR45BQ5MNZ6 344 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 WBP2NLQ6ICG8 309 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 CCDC74AQ96AQ1 378 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 SFXN2Q96NB2 322 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 TSPAN32Q96QS1 320 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 SLITRK2Q9H156 845 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 FBRSQ9HAH7 460 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 MRPS33Q9Y291 106 aaKnown RBP14.35□□□□□ -0.11
LDLR-204ENST00000545707 SPEF1Q9Y4P9 236 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 PIAS3Q9Y6X2 628 aa14.35□□□□□ -0.11
LDLR-204ENST00000545707 KIR2DS5A0A0G2JLQ3 304 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 A0A0G2JNG1 304 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 CDC14CA4D256 554 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 KIR2DS3K7RE56 304 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 PRAF2O60831 178 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 CLPSP04118 112 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 IFI6P09912 130 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 PSMD4P55036 377 aaKnown RBP14.34□□□□□ -0.11
LDLR-204ENST00000545707 FUT7Q11130 342 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 HTR4Q13639 388 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 KIR2DS5Q14953 304 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 AANATQ16613 207 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 ELFN2Q5R3F8 820 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 SFRP5Q5T4F7 317 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 SLC6A19Q695T7 634 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 SLC35D2Q76EJ3 337 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 CDC20BQ86Y33 519 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 PRSS35Q8N3Z0 413 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 FAM71CQ8NEG0 241 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 OR51D1Q8NGF3 324 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 OR2G2Q8NGZ5 317 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 ZDHHC1Q8WTX9 485 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 NSMAFQ92636 917 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 GPX7Q96SL4 187 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms