RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 RAP1AP62834 184 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 RNFT1Q5M7Z0 435 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 LCN1P1Q5VSP4 162 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 UBE2UQ5VVX9 321 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 FAM205BPQ63HN1 556 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 ASB18Q6ZVZ8 466 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 OR51G2Q8NGK0 314 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 FAM122AQ96E09 287 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 ZHX1-C8orf76Q96EF9 292 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 CRELD1Q96HD1 420 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 SRXN1Q9BYN0 137 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 FAM192AQ9GZU8 254 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 TNFRSF10DQ9UBN6 386 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 PRSS37A4D1T9 235 aa27.21■■□□□ 1.95
CCM2-219ENST00000544363 RAMP1O60894 148 aa27.21■■□□□ 1.95
CCM2-219ENST00000544363 LHX2P50458 406 aa27.21■■□□□ 1.95
CCM2-219ENST00000544363 CLDN15P56746 228 aa27.21■■□□□ 1.95
CCM2-219ENST00000544363 PON3Q15166 354 aa27.21■■□□□ 1.95
CCM2-219ENST00000544363 BORAQ6PGQ7 559 aa27.21■■□□□ 1.95
CCM2-219ENST00000544363 TRILQ7L0X0 811 aa27.21■■□□□ 1.95
CCM2-219ENST00000544363 GPAT4Q86UL3 456 aa27.21■■□□□ 1.95
CCM2-219ENST00000544363 ZDHHC11Q9H8X9 412 aa27.21■■□□□ 1.95
CCM2-219ENST00000544363 VSX1Q9NZR4 365 aaPredicted RBP27.21■■□□□ 1.95
CCM2-219ENST00000544363 PTHP01270 115 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 LCKP06239 509 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 TTKP33981 857 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 FOXB2Q5VYV0 432 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 OR51L1Q8NGJ5 315 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 ZNRF4Q8WWF5 429 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 TXNDC15Q96J42 360 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 SYT4Q9H2B2 425 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 MED29Q9NX70 200 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 CLEC2DQ9UHP7 191 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 ERGIC3Q9Y282 383 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 ACACAQ13085 2346 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 LOC400499M0QZD8 3231 aa27.2■■□□□ 1.95
CCM2-219ENST00000544363 J3QRE1 110 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 SEC14L2O76054 403 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 VAMP5O95183 116 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 PMP22Q01453 160 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 POU4F2Q12837 409 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 C1DQ13901 141 aaKnown RBP27.19■■□□□ 1.94
CCM2-219ENST00000544363 PDSS1Q5T2R2 415 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 SYT6Q5T7P8 510 aaPredicted RBP27.19■■□□□ 1.94
CCM2-219ENST00000544363 LRRC69Q6ZNQ3 347 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 PM20D2Q8IYS1 436 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 OR13F1Q8NGS4 319 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 OR2T4Q8NH00 348 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 OR10D3Q8NH80 312 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 ZMYND19Q96E35 227 aaPredicted RBP27.19■■□□□ 1.94
CCM2-219ENST00000544363 TSSK2Q96PF2 358 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 SRA1Q9HD15 236 aaKnown RBP27.19■■□□□ 1.94
CCM2-219ENST00000544363 MOKQ9UQ07 419 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 EXOSC1Q9Y3B2 195 aaKnown RBP27.19■■□□□ 1.94
CCM2-219ENST00000544363 URB1O60287 2271 aaKnown RBP27.19■■□□□ 1.94
CCM2-219ENST00000544363 TRAF3IP2O43734 574 aaPredicted RBP27.19■■□□□ 1.94
CCM2-219ENST00000544363 GLCEO94923 617 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 IGHA1P01876 353 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 ZNF43P17038 809 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 MYL12AP19105 171 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 GP2P55259 537 aaKnown RBP27.19■■□□□ 1.94
CCM2-219ENST00000544363 RUNX1T1Q06455 604 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 GGTLC2Q14390 218 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 UCN2Q96RP3 112 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 JAM3Q9BX67 310 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 DEFB127Q9H1M4 99 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 ADGRL4Q9HBW9 690 aa27.19■■□□□ 1.94
CCM2-219ENST00000544363 CHCHD3Q9NX63 227 aaKnown RBP27.19■■□□□ 1.94
CCM2-219ENST00000544363 TNRC6AQ8NDV7 1962 aaKnown RBP27.18■■□□□ 1.94
CCM2-219ENST00000544363 IGHV3-15A0A0B4J1V0 119 aa27.18■■□□□ 1.94
CCM2-219ENST00000544363 SLC22A23A1A5C7 686 aa27.18■■□□□ 1.94
CCM2-219ENST00000544363 CXCL13O43927 109 aa27.18■■□□□ 1.94
CCM2-219ENST00000544363 SBK2P0C263 348 aa27.18■■□□□ 1.94
CCM2-219ENST00000544363 ENPP1P22413 925 aa27.18■■□□□ 1.94
CCM2-219ENST00000544363 EIF1AXP47813 144 aaKnown RBP27.18■■□□□ 1.94
CCM2-219ENST00000544363 ETV1P50549 477 aa27.18■■□□□ 1.94
CCM2-219ENST00000544363 ZNF169Q14929 603 aaPredicted RBP27.18■■□□□ 1.94
CCM2-219ENST00000544363 LINC01590Q5TEZ4 76 aa27.18■■□□□ 1.94
CCM2-219ENST00000544363 OR6V1Q8N148 313 aa27.18■■□□□ 1.94
CCM2-219ENST00000544363 ABTB1Q969K4 478 aaPredicted RBP27.18■■□□□ 1.94
CCM2-219ENST00000544363 TIGARQ9NQ88 270 aa27.18■■□□□ 1.94
CCM2-219ENST00000544363 RAXQ9Y2V3 346 aa27.18■■□□□ 1.94
CCM2-219ENST00000544363 PCDHGB7Q9Y5F8 929 aa27.18■■□□□ 1.94
CCM2-219ENST00000544363 CFAP47Q6ZTR5 3102 aa27.18■■□□□ 1.94
CCM2-219ENST00000544363 MKRN2OSH3BPM6 223 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 DCTN6O00399 190 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 ITGB2P05107 769 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 ZNF708P17019 499 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 PSMB9P28065 219 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 PYCR1P32322 319 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 BIDP55957 195 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 CLDN18P56856 261 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 POU4F3Q15319 338 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 BCL2A1Q16548 175 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 EEF1A1P5Q5VTE0 462 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 NANOGP1Q8N7R0 232 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 PROKR2Q8NFJ6 384 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 NEIL3Q8TAT5 605 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 ALG12Q9BV10 488 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 MND1Q9BWT6 205 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms