RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 LYPD4Q6UWN0 246 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 DEF8Q6ZN54 512 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 SLC35F3Q8IY50 421 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 OR4E2Q8NGC2 313 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 NEIL3Q8TAT5 605 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 LCN9Q8WX39 176 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ATP6V0BQ99437 205 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 MACROD1Q9BQ69 325 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 CACNG6Q9BXT2 260 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 TMEM38AQ9H6F2 299 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 NMNAT1Q9HAN9 279 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 POMT2Q9UKY4 750 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 KCNIP3Q9Y2W7 256 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 MRPS18CQ9Y3D5 142 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 SNRNP200O75643 2136 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 SPTY2D1-AS1A0A0U1RR47 76 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 A0A1B0GVI7 797 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 PRR23D1E9PI22 279 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 NPIPA7E9PJI5 369 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 MAN2B1O00754 1011 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 IGHEP01854 428 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 NPSP0C0P6 89 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 NPIPA8P0DM63 369 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 PRR23D2P0DMB1 279 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ANXA7P20073 488 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 PXNP49023 591 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 FZD2Q14332 565 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 CHRFAM7AQ494W8 412 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 PLK5Q496M5 336 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 LPCAT3Q6P1A2 487 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ABHD17CQ6PCB6 329 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 VN1R4Q7Z5H5 301 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ADCK2Q7Z695 626 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 SFTPA2Q8IWL1 248 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 POMGNT2Q8NAT1 580 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 BVESQ8NE79 360 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 OR52M1Q8NGK5 317 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 OR4C15Q8NGM1 316 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 OR5AK3PQ8NH89 298 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 OR2M2Q96R28 347 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 SOSTQ9BQB4 213 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 SLC25A19Q9HC21 320 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 MIEF1Q9NQG6 463 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 C5AR2Q9P296 337 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 APOBEC3BQ9UH17 382 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 MEIKINA0A087WXM9 373 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 A0A0G2JN53 185 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 C7orf66A4D0T2 115 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ANXA2P2A6NMY6 339 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 A8MXK9 166 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 TNFSF14O43557 240 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ONECUT2O95948 504 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 TFPIP10646 304 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 PIPP12273 146 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 CPEP16870 476 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 NT5EP21589 574 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ITGA3P26006 1051 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 DDTP30046 118 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 CMPK1P30085 196 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 SOX18P35713 384 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 STARD6P59095 220 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ACSM1Q08AH1 577 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 GPR18Q14330 331 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 HEPACAMQ14CZ8 416 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 PRRT3Q5FWE3 981 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 C3orf38Q5JPI3 329 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 PRAMEF20Q5VT98 475 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 METAP1DQ6UB28 335 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 IQCHQ86VS3 1027 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 SLC30A8Q8IWU4 369 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 GPR135Q8IZ08 494 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 BMPERQ8N8U9 685 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 BOLLQ8N9W6 283 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ACBD4Q8NC06 268 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 PATE1Q8WXA2 126 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ZFP3Q96NJ6 502 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 SLC38A3Q99624 504 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 DNAJB11Q9UBS4 358 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 FTSJ1Q9UET6 329 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 USP34Q70CQ2 3546 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 MYO10Q9HD67 2058 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 IGHV1OR15-9A0A0B4J2B8 117 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 A0A0U1RQK1 487 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 A0A1W2PPC1 479 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 ZNF320A2RRD8 509 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 OR10H3O60404 316 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 FADS1O60427 444 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 KHDRBS3O75525 346 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 TFP02787 698 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 UQCRC2P22695 453 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 THBS4P35443 961 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 CHI3L1P36222 383 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 PCBP3P57721 371 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 SELENOVP59797 346 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 UBE2G2P60604 165 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 RASGEF1BQ0VAM2 473 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 ECH1Q13011 328 aa7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 COL9A2Q14055 689 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 ATPAF1Q5TC12 328 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-221ENST00000542407 FCRL6Q6DN72 434 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms