RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 FOXG1P55316 489 aaPredicted RBP12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 BIDP55957 195 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 GK3PQ14409 553 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 HIST3H3Q16695 136 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 PODNL1Q6PEZ8 512 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 KLHL17Q6TDP4 642 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 LINGO2Q7L985 606 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 LSRQ86X29 649 aaPredicted RBP12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 WFDC8Q8IUA0 241 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 AQP12AQ8IXF9 295 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 WDR31Q8NA23 367 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 OR1K1Q8NGR3 316 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 FNDC8Q8TC99 324 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 TMEM54Q969K7 222 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 ZNF566Q969W8 418 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 PIK3IP1Q96FE7 263 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 PLPPR2Q96GM1 343 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 MRPL13Q9BYD1 178 aaKnown RBP12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 TRIM15Q9C019 465 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 TXNIPQ9H3M7 391 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 CRLF2Q9HC73 371 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 MED29Q9NX70 200 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 MGAT4BQ9UQ53 548 aa12.08□□□□□ -0.48
TNFSF13B-206ENST00000542136 SH3PXD2BA1X283 911 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 ZNF99A8MXY4 864 aaPredicted RBP12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 EFCAB9A8MZ26 197 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 TMCC2O75069 709 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 IGHMP01871 453 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 SAGP10523 405 aaPredicted RBP12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 NR2C1P13056 603 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 ATP6V1B2P21281 511 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 HOXC12P31275 282 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 AQP2P41181 271 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 ZNF133P52736 654 aaPredicted RBP12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 CHRNB3Q05901 458 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 FHL1Q13642 323 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 LAPTM4AQ15012 233 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 NRN1LQ496H8 165 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 ZBED5Q49AG3 693 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 FAM98BQ52LJ0 330 aaKnown RBP12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 FAM205BPQ63HN1 556 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 TBPL2Q6SJ96 375 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 TMEM108Q6UXF1 575 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 CYP2R1Q6VVX0 501 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 CDH24Q86UP0 819 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 OR4K5Q8NGD3 323 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 OR6N1Q8NGY5 312 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 MBD6Q96DN6 1003 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 LRGUKQ96M69 825 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 EMC6Q9BV81 110 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 NDEL1Q9GZM8 345 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 DENND2DQ9H6A0 471 aaPredicted RBP12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 SMURF2Q9HAU4 748 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 GLTPQ9NZD2 209 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 ST6GALNAC2Q9UJ37 374 aa12.07□□□□□ -0.48
TNFSF13B-206ENST00000542136 GSC2O15499 205 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 CLOCKO15516 846 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 AHCYL1O43865 530 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 PIP5K1CO60331 668 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 PTP4A3O75365 173 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 PDE5AO76074 875 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 IGHG1P01857 330 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 PGA4P0DJD7 388 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 PGA3P0DJD8 388 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 IFNGR2P38484 337 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 OMPP47874 163 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 LIMS1P48059 325 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 CSNK1A1P48729 337 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 LSM11P83369 360 aaKnown RBP eCLIP12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 ARF1P84077 181 aaKnown RBP12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 LGALS3BPQ08380 585 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 CAMK2DQ13557 499 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 CEACAM16Q2WEN9 425 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 TBRG1Q3YBR2 411 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 ALG10Q5BKT4 473 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 FGD3Q5JSP0 725 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 ARMC4Q5T2S8 1044 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 KLHL24Q6TFL4 600 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 LRRC75AQ8NAA5 344 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 ALKBH3Q96Q83 286 aaPredicted RBP12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 TNFRSF13CQ96RJ3 184 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 TMCC3Q9ULS5 477 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 SIGLEC7Q9Y286 467 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 RNF115Q9Y4L5 304 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 ABCA4P78363 2273 aa12.06□□□□□ -0.48
TNFSF13B-206ENST00000542136 TRBV4-1A0A0J9YWV2 114 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 A0A1W2PPR1 153 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 DPRXA6NFQ7 191 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 A6NIZ1 184 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 M0R3G1 203 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 CDC42EP2O14613 210 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 RAF1P04049 648 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 F13BP05160 661 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 CD3EP07766 207 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 RAP2AP10114 183 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 ACADSP16219 412 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 RAP1BP61224 184 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 RPL27P61353 136 aaKnown RBP12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 RAP1AP62834 184 aa12.05□□□□□ -0.48
TNFSF13B-206ENST00000542136 BSPH1Q075Z2 132 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms