RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 EMC4Q5J8M3 183 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 GPR139Q6DWJ6 353 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 ZPLD1Q8TCW7 415 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 DIMT1Q9UNQ2 313 aaKnown RBP24.86■■□□□ 1.57
CCM2-218ENST00000541586 MRPS18CQ9Y3D5 142 aaKnown RBP24.86■■□□□ 1.57
CCM2-218ENST00000541586 CEPT1Q9Y6K0 416 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 COL6A6A6NMZ7 2263 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 IRGMA1A4Y4 181 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 MS4A18H0YCH9 400 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 AKR7A3O95154 331 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 RAB36O95755 333 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 PLGP00747 810 aaPredicted RBP24.86■■□□□ 1.57
CCM2-218ENST00000541586 LCKP06239 509 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 TTKP33981 857 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 CDKN2AP42771 156 aaKnown RBP24.86■■□□□ 1.57
CCM2-218ENST00000541586 PUDPQ08623 228 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 ZP4Q12836 540 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 MS4A18Q3C1V0 323 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 UBE2UQ5VVX9 321 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 ZNF324BQ6AW86 544 aaPredicted RBP24.86■■□□□ 1.57
CCM2-218ENST00000541586 B3GLCTQ6Y288 498 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 JAZF1Q86VZ6 243 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 GHDCQ8N2G8 530 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 OR9Q1Q8NGQ5 310 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 KISS1RQ969F8 398 aaPredicted RBP24.86■■□□□ 1.57
CCM2-218ENST00000541586 FGF20Q9NP95 211 aaPredicted RBP24.86■■□□□ 1.57
CCM2-218ENST00000541586 ACKR4Q9NPB9 350 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 TNFRSF10DQ9UBN6 386 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 WARS2Q9UGM6 360 aaKnown RBP24.86■■□□□ 1.57
CCM2-218ENST00000541586 TRGV5A0A0B4J1U4 118 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 OR6C68A6NDL8 312 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 CCDC182A6NF36 153 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 PTHP01270 115 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 GYPBP06028 91 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 KRR1Q13601 381 aaKnown RBP24.85■■□□□ 1.57
CCM2-218ENST00000541586 MESTQ5EB52 335 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 LEG1Q6P5S2 330 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 SHFQ7M4L6 423 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 KDM8Q8N371 416 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 FCGR1BQ92637 280 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 TEAD3Q99594 435 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 OR2B2Q9GZK3 357 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 B3GALT5Q9Y2C3 310 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 ZNF407Q9C0G0 2248 aa24.85■■□□□ 1.57
CCM2-218ENST00000541586 MED12Q93074 2177 aa24.84■■□□□ 1.57
CCM2-218ENST00000541586 SLC22A31A6NKX4 558 aa24.84■■□□□ 1.57
CCM2-218ENST00000541586 DCKP27707 260 aa24.84■■□□□ 1.57
CCM2-218ENST00000541586 OR2B6P58173 313 aa24.84■■□□□ 1.57
CCM2-218ENST00000541586 RPS7P62081 194 aaKnown RBP24.84■■□□□ 1.57
CCM2-218ENST00000541586 RAC1P63000 192 aa24.84■■□□□ 1.57
CCM2-218ENST00000541586 ACKR1Q16570 336 aa24.84■■□□□ 1.57
CCM2-218ENST00000541586 SYT6Q5T7P8 510 aaPredicted RBP24.84■■□□□ 1.57
CCM2-218ENST00000541586 MIB2Q96AX9 1013 aa24.84■■□□□ 1.57
CCM2-218ENST00000541586 GPR137Q96N19 417 aa24.84■■□□□ 1.57
CCM2-218ENST00000541586 SFXN2Q96NB2 322 aa24.84■■□□□ 1.57
CCM2-218ENST00000541586 EXOGQ9Y2C4 368 aaKnown RBP24.84■■□□□ 1.57
CCM2-218ENST00000541586 DIO1P49895 249 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 SLC16A1P53985 500 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 RNLSQ5VYX0 342 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 B3GNT6Q6ZMB0 384 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 TMPPEQ6ZT21 453 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 ZNF843Q8N446 348 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 OR4F15Q8NGB8 312 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 DGCR14Q96DF8 476 aaKnown RBP24.83■■□□□ 1.57
CCM2-218ENST00000541586 NMNAT2Q9BZQ4 307 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 TXNIPQ9H3M7 391 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 CLEC2DQ9UHP7 191 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 TRAPPC4Q9Y296 219 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 DNAJC13O75165 2243 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 A0A1B0GTH9 108 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 CCDC160A6NGH7 325 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 HLA-DOBP13765 273 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 PSMB9P28065 219 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 RPL27P61353 136 aaKnown RBP24.83■■□□□ 1.57
CCM2-218ENST00000541586 TMED1Q13445 227 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 KRTCAP3Q53RY4 240 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 TRILQ7L0X0 811 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 ARIH2OSQ8N7S6 290 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 TMEM99Q8N816 258 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 NEIL3Q8TAT5 605 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 SMPDL3BQ92485 455 aa24.83■■□□□ 1.57
CCM2-218ENST00000541586 B8ZZF3 427 aa24.82■■□□□ 1.56
CCM2-218ENST00000541586 SULT2B1O00204 365 aa24.82■■□□□ 1.56
CCM2-218ENST00000541586 IGHMP01871 453 aa24.82■■□□□ 1.56
CCM2-218ENST00000541586 GSTT1P30711 240 aa24.82■■□□□ 1.56
CCM2-218ENST00000541586 ARMC4Q5T2S8 1044 aa24.82■■□□□ 1.56
CCM2-218ENST00000541586 OR51G2Q8NGK0 314 aa24.82■■□□□ 1.56
CCM2-218ENST00000541586 ASB6Q9NWX5 421 aa24.82■■□□□ 1.56
CCM2-218ENST00000541586 ERGIC3Q9Y282 383 aa24.82■■□□□ 1.56
CCM2-218ENST00000541586 A0A1W2PRG6 482 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 PMS2P2O95744 297 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 IGHG3P01860 377 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 ATP6V1E1P36543 226 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 TDGF1P3P51864 188 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 CLVS1Q8IUQ0 354 aaPredicted RBP24.81■■□□□ 1.56
CCM2-218ENST00000541586 ADPRHL1Q8NDY3 354 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 ZNF519Q8TB69 540 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 SLX1AQ9BQ83 275 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 FANCFQ9NPI8 374 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 C1QL1O75973 258 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms