RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ACTR3BQ9P1U1 418 aa8.09□□□□□ -1.11
SNHG1-215ENST00000540904 PRPF19Q9UMS4 504 aaKnown RBP8.09□□□□□ -1.11
SNHG1-215ENST00000540904 AMDHD2Q9Y303 409 aa8.09□□□□□ -1.11
SNHG1-215ENST00000540904 RNF115Q9Y4L5 304 aa8.09□□□□□ -1.11
SNHG1-215ENST00000540904 FREM1Q5H8C1 2179 aa8.09□□□□□ -1.11
SNHG1-215ENST00000540904 TEX15Q9BXT5 2789 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 TRBV4-1A0A0J9YWV2 114 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 A0A1W2PRG6 482 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 HTR3EA5X5Y0 456 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 EFCAB9A8MZ26 197 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 MCIDASD6RGH6 385 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 ABCD4O14678 606 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 SEC14L2O76054 403 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 ATE1O95260 518 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 BCL10O95999 233 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 WNT11O96014 354 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 SEMG1P04279 462 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 ATP6V1B2P21281 511 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 GPR4P46093 362 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 CSNK1A1P48729 337 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 ART1P52961 327 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 SH3BGRP55822 239 aaPredicted RBP8.08□□□□□ -1.12
SNHG1-215ENST00000540904 TUBA1BP68363 451 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 TUBA4AP68366 448 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 SPIBQ01892 262 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 PRKCDQ05655 676 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 TBRG1Q3YBR2 411 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 ANKRD16Q6P6B7 361 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 PODNL1Q6PEZ8 512 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 KLHL17Q6TDP4 642 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 TMEM108Q6UXF1 575 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 TUBA1AQ71U36 451 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 OAFQ86UD1 273 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 DHFR2Q86XF0 187 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 RNF113BQ8IZP6 322 aaKnown RBP8.08□□□□□ -1.12
SNHG1-215ENST00000540904 OR13C2Q8NGS9 318 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 OR51A7Q8NH64 312 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 OR6X1Q8NH79 312 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 AKAP1Q92667 903 aaKnown RBP eCLIP8.08□□□□□ -1.12
SNHG1-215ENST00000540904 BCL2L2Q92843 193 aaPredicted RBP8.08□□□□□ -1.12
SNHG1-215ENST00000540904 ZDHHC16Q969W1 377 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF566Q969W8 418 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 CLPTM1LQ96KA5 538 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 LRR1Q96L50 414 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 ADAD1Q96M93 576 aaKnown RBP8.08□□□□□ -1.12
SNHG1-215ENST00000540904 SEPHS2Q99611 448 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 TMEM204Q9BSN7 226 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 ULBP2Q9BZM5 246 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 C1orf21Q9H246 121 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 MUC13Q9H3R2 512 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 ANKRD19PQ9H560 264 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 IL1RAPQ9NPH3 570 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 INIPQ9NRY2 104 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 CSMD2Q7Z408 3487 aa8.08□□□□□ -1.12
SNHG1-215ENST00000540904 POLQO75417 2590 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 TRAV27A0A087WT01 109 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF99A8MXY4 864 aaPredicted RBP8.07□□□□□ -1.12
SNHG1-215ENST00000540904 CDC42EP2O14613 210 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 HS3ST1O14792 307 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 GYG2O15488 501 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 GADD45GO95257 159 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 IGHG1P01857 330 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 FABP3P05413 133 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 TSPAN19P0C672 248 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 CD53P19397 219 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 PTAFRP25105 342 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 CD40P25942 277 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 CAPZA2P47755 286 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 DAP3P51398 398 aaKnown RBP8.07□□□□□ -1.12
SNHG1-215ENST00000540904 CLRN1P58418 232 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 SMIM11AP58511 58 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 MS4A2Q01362 244 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 RUNX1T1Q06455 604 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 SPOCK1Q08629 439 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 TOP3AQ13472 1001 aaPredicted RBP8.07□□□□□ -1.12
SNHG1-215ENST00000540904 TRIM25Q14258 630 aaKnown RBP8.07□□□□□ -1.12
SNHG1-215ENST00000540904 IQCCQ4KMZ1 466 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 ALG10Q5BKT4 473 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 SLC22A25Q6T423 547 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 C20orf204Q6ZNR8 217 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 IGFN1Q86VF2 1251 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 ZDHHC21Q8IVQ6 265 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 SYT14Q8NB59 555 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 KBTBD8Q8NFY9 601 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 OR4K5Q8NGD3 323 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 LILRB1Q8NHL6 650 aaPredicted RBP8.07□□□□□ -1.12
SNHG1-215ENST00000540904 NEUROG1Q92886 237 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 SLC25A44Q96H78 314 aaPredicted RBP8.07□□□□□ -1.12
SNHG1-215ENST00000540904 BOD1Q96IK1 185 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 FAM46AQ96IP4 442 aaKnown RBP8.07□□□□□ -1.12
SNHG1-215ENST00000540904 TNFRSF13CQ96RJ3 184 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 CCL19Q99731 98 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 NELFAQ9H3P2 528 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 OBP2BQ9NPH6 170 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 GLTPQ9NZD2 209 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 TMEM5Q9Y2B1 443 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 POFUT2Q9Y2G5 429 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 HIF3AQ9Y2N7 669 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 MAGED1Q9Y5V3 778 aaPredicted RBP8.07□□□□□ -1.12
SNHG1-215ENST00000540904 PDZD2O15018 2839 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms