RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 RAD51DO75771 328 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 GASTP01350 101 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 IGHMP01871 453 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 PGA4P0DJD7 388 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 PGA3P0DJD8 388 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 SAGP10523 405 aaPredicted RBP11.5□□□□□ -0.57
CHFR-216ENST00000538235 CALRP27797 417 aaKnown RBP11.5□□□□□ -0.57
CHFR-216ENST00000538235 LCN6P62502 163 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 IL1RL1Q01638 556 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 FMODQ06828 376 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 TOP3AQ13472 1001 aaPredicted RBP11.5□□□□□ -0.57
CHFR-216ENST00000538235 MESTQ5EB52 335 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 SFRP5Q5T4F7 317 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 C1orf94Q6P1W5 598 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 KLHL17Q6TDP4 642 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 C20orf196Q8IYI0 205 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 PYDC1Q8WXC3 89 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 TMEM54Q969K7 222 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 HS3ST6Q96QI5 342 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 NIPSNAP1Q9BPW8 284 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 ACTR6Q9GZN1 396 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 EGLN3Q9H6Z9 239 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 NOX3Q9HBY0 568 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 SAMHD1Q9Y3Z3 626 aaKnown RBP11.5□□□□□ -0.57
CHFR-216ENST00000538235 NOX1Q9Y5S8 564 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 AKAP6Q13023 2319 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 SH3D21A4FU49 640 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 UNC119BA6NIH7 251 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 RNF13O43567 381 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 OR10H3O60404 316 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 TRMUO75648 421 aaKnown RBP11.49□□□□□ -0.57
CHFR-216ENST00000538235 CST1P01037 141 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 FPR3P25089 353 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 DNAJA1P31689 397 aaKnown RBP11.49□□□□□ -0.57
CHFR-216ENST00000538235 SLC9A3P48764 834 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 PCYT1AP49585 367 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 ACTR3P61158 418 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 ERVK-25P63136 954 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 MYBPC1Q00872 1141 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 C1DQ13901 141 aaKnown RBP11.49□□□□□ -0.57
CHFR-216ENST00000538235 TAB1Q15750 504 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 GABRA6Q16445 453 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 ZBED5Q49AG3 693 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 ALG10Q5BKT4 473 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 ZNF620Q6ZNG0 422 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 BEND4Q6ZU67 534 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 OAFQ86UD1 273 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 MYPOPQ86VE0 399 aaPredicted RBP11.49□□□□□ -0.57
CHFR-216ENST00000538235 WDR31Q8NA23 367 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 AQP11Q8NBQ7 271 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 ANKK1Q8NFD2 765 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 LRTOMTQ8WZ04 291 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 MARVELD3Q96A59 401 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 RASD2Q96D21 266 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 ZC3HAV1LQ96H79 300 aaKnown RBP11.49□□□□□ -0.57
CHFR-216ENST00000538235 Q96M85 177 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 KATNB1Q9BVA0 655 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 MRPL13Q9BYD1 178 aaKnown RBP11.49□□□□□ -0.57
CHFR-216ENST00000538235 LINC00470Q9BZP3 86 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 GPR35Q9HC97 309 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 INIPQ9NRY2 104 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 ELOVL5Q9NYP7 299 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 ZNF224Q9NZL3 707 aa11.49□□□□□ -0.57
CHFR-216ENST00000538235 FAM221AA4D161 298 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 C16orf97H3BN30 126 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 M0R3G1 203 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 PPP1R3DO95685 299 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 COX6B1P14854 86 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 PRKACGP22612 351 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 CTXN1P60606 82 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 TUBA1BP68363 451 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 TUBA4AP68366 448 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 ROR2Q01974 943 aaKnown RBP11.48□□□□□ -0.57
CHFR-216ENST00000538235 ITGADQ13349 1161 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 HIST3H3Q16695 136 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 CEACAM16Q2WEN9 425 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 HIKESHIQ53FT3 197 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 LRFN4Q6PJG9 635 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 PTCHD4Q6ZW05 846 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 TUBA1AQ71U36 451 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 BHLHA15Q7RTS1 189 aaPredicted RBP11.48□□□□□ -0.57
CHFR-216ENST00000538235 AMIGO2Q86SJ2 522 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 UBE2J2Q8N2K1 259 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 NOXO1Q8NFA2 376 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 OR10G2Q8NGC3 310 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 OR1K1Q8NGR3 316 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 OR6X1Q8NH79 312 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 FGFBP3Q8TAT2 258 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 FANK1Q8TC84 345 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 GPX7Q96SL4 187 aaPredicted RBP11.48□□□□□ -0.57
CHFR-216ENST00000538235 KCNK17Q96T54 332 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 OR52D1Q9H346 318 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 REEP1Q9H902 201 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 SEC61A2Q9H9S3 476 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 ARMC1Q9NVT9 282 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 ASB6Q9NWX5 421 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 REV1Q9UBZ9 1251 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 ZNF346Q9UL40 294 aaKnown RBP11.48□□□□□ -0.57
CHFR-216ENST00000538235 TMEM5Q9Y2B1 443 aa11.48□□□□□ -0.57
CHFR-216ENST00000538235 ROS1P08922 2347 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms