RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 CEBPEQ15744 281 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 NTRK2Q16620 822 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 CMPK2Q5EBM0 449 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 NET1Q7Z628 596 aaPredicted RBP6.48□□□□□ -1.37
MSH6-209ENST00000538136 ABHD4Q8TB40 342 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 PGAM5Q96HS1 289 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 SECISBP2Q96T21 854 aaKnown RBP6.48□□□□□ -1.37
MSH6-209ENST00000538136 SYT3Q9BQG1 590 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 CHODLQ9H9P2 273 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 UNC79Q9P2D8 2635 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 TRAV36DV7A0A075B6V5 113 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 CRYAAP02489 173 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 GRPP07492 148 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 HTR2AP28223 471 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 GCH1P30793 250 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 CCNIQ14094 377 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 LTC4SQ16873 150 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 ANKDD1AQ495B1 522 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 TP53I3Q53FA7 332 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 TSPO2Q5TGU0 170 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 ZCCHC12Q6PEW1 402 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 LRRN1Q6UXK5 716 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 ADGRG3Q86Y34 549 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 PDZD9Q8IXQ8 264 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 PRRC1Q96M27 445 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 SPRY3O43610 288 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 APEX1P27695 318 aaKnown RBP6.48□□□□□ -1.37
MSH6-209ENST00000538136 GRNP28799 593 aaKnown RBP6.48□□□□□ -1.37
MSH6-209ENST00000538136 RBMXP38159 391 aaKnown RBP6.48□□□□□ -1.37
MSH6-209ENST00000538136 CXCR4P61073 352 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 RAB39AQ14964 217 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 SEC23BQ15437 767 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 ESPNLQ6ZVH7 1005 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 CBLL1Q75N03 491 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 PAQR8Q8TEZ7 354 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 MIB2Q96AX9 1013 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 LMF2Q9BU23 707 aaKnown RBP6.48□□□□□ -1.37
MSH6-209ENST00000538136 LAT2Q9GZY6 243 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 TMEM45AQ9NWC5 275 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 PARPBPQ9NWS1 579 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 PCDHB10Q9UN67 800 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 A0A1W2PRD5 423 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 A0A1W2PRF3 423 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 A0A1W2PRM7 423 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 SNTNA6NMZ2 147 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 GPR171O14626 319 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 EIF4E2O60573 245 aaKnown RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 ATP6V1G2O95670 118 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 APEHP13798 732 aaKnown RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 FOXG1P55316 489 aaPredicted RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 RAB1AP62820 205 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 RAC1P63000 192 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 ADRM1Q16186 407 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 ZBED5Q49AG3 693 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 NUFIP2Q7Z417 695 aaKnown RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 OR4F15Q8NGB8 312 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 OR5J2Q8NH18 312 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 SPACA5Q96QH8 159 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 SAP130Q9H0E3 1048 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 TP63Q9H3D4 680 aaPredicted RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 PLGRKTQ9HBL7 147 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 IL1RAPQ9NPH3 570 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 LY6HO94772 140 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 ENDOUP21128 410 aaKnown RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 PRDX6P30041 224 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 APOBEC1P41238 236 aaKnown RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 ACTR3P61158 418 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 RAB35Q15286 201 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 SF3B4Q15427 424 aaKnown RBP eCLIP6.47□□□□□ -1.371e-6■■■□□ 16.5
MSH6-209ENST00000538136 CXXC5Q7LFL8 322 aaKnown RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 TMEM179BQ7Z7N9 219 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 C9orf106Q8NAJ2 232 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 OR8S1Q8NH09 359 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 PERPQ96FX8 193 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 SLC24A3Q9HC58 644 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 TNRC6AQ8NDV7 1962 aaKnown RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 ZFHX4Q86UP3 3567 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 A0A087WUJ7 227 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 TIMM8AO60220 97 aaPredicted RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 KIAA0513O60268 411 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 NME2P1O60361 137 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 UPK3AO75631 287 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 OR8G3PP0DMU2 310 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 PIPP12273 146 aaPredicted RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 ANXA8P13928 327 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 NME2P22392 152 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 ELK4P28324 431 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 FUT5Q11128 374 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 VEZF1Q14119 521 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 FAM57BQ71RH2 274 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 COMTD1Q86VU5 262 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 TIGD4Q8IY51 512 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 ADGRG5Q8IZF4 528 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 PRR18Q8N4B5 295 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 OR5K1Q8NHB7 308 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 C22orf15Q8WYQ4 148 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 PIGCQ92535 297 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 FBXW5Q969U6 566 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 GIMAP5Q96F15 307 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms