RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 ADAM18Q9Y3Q7 739 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 B4DXG7 233 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 ZNF44P15621 663 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 EFNA3P52797 238 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 RBMS2Q15434 407 aaKnown RBP16.14■□□□□ 0.17
PHRF1-205ENST00000533464 VASH1Q7L8A9 365 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-205ENST00000533464 CAMKMTQ7Z624 323 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 PHYHIPQ92561 330 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 LIN7BQ9HAP6 207 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 CMC2Q9NRP2 79 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 NPFFR2Q9Y5X5 522 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 PRKNO60260 465 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-205ENST00000533464 MT-ATP6P00846 226 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 SRMP19623 302 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 EPHA1P21709 976 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 EIF1P41567 113 aaKnown RBP16.13■□□□□ 0.17
PHRF1-205ENST00000533464 MTCP1P56278 107 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 TMEM59Q9BXS4 323 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 CCDC86Q9H6F5 360 aaKnown RBP16.13■□□□□ 0.17
PHRF1-205ENST00000533464 ASF1BQ9NVP2 202 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 A0A1W2PPC4 97 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 MFAP5Q13361 173 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 TMEM215Q68D42 235 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 SLC16A9Q7RTY1 509 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 RSPRY1Q96DX4 576 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 PRAMEF25A6NGN4 478 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 GALEQ14376 348 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 IDO2Q6ZQW0 420 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 SIAH3Q8IW03 269 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 C16orf52Q8NHV5 167 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 CPT1CQ8TCG5 803 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 SLC25A46Q96AG3 418 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 ZNF845Q96IR2 970 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-205ENST00000533464 UBE2ZQ9H832 354 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-205ENST00000533464 CAMK2AQ9UQM7 478 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 ADAM23O75077 832 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 FCGR2AP12318 317 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 MRPL19P49406 292 aaKnown RBP16.13■□□□□ 0.17
PHRF1-205ENST00000533464 GPR157Q5UAW9 335 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 LIPNQ5VXI9 398 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 LINC00299Q6ZSB3 139 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 RHNO1Q9BSD3 238 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 PAPOLGQ9BWT3 736 aaKnown RBP16.13■□□□□ 0.17
PHRF1-205ENST00000533464 ANKRD10Q9NXR5 420 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 YARS2Q9Y2Z4 477 aaKnown RBP16.13■□□□□ 0.17
PHRF1-205ENST00000533464 UGT2A1Q9Y4X1 527 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 PCDHGA1Q9Y5H4 931 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 MCM3APO60318 1980 aa16.13■□□□□ 0.17
PHRF1-205ENST00000533464 TTLL8A6PVC2 850 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 FUCA1P04066 466 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 CD46P15529 392 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 HIST1H1CP16403 213 aaKnown RBP16.12■□□□□ 0.17
PHRF1-205ENST00000533464 TUBG1P23258 451 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 KIAA0040Q15053 153 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 H1FNTQ75WM6 255 aaPredicted RBP16.12■□□□□ 0.17
PHRF1-205ENST00000533464 CALHM3Q86XJ0 350 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 OR9K2Q8NGE7 335 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 IL1F10Q8WWZ1 152 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 IDSB3KWA1 339 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 OR7C1O76099 320 aaPredicted RBP16.12■□□□□ 0.17
PHRF1-205ENST00000533464 TGFBR1P36897 503 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 CLDN6P56747 220 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 RAP2BP61225 183 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 YBX1P67809 324 aaKnown RBP16.12■□□□□ 0.17
PHRF1-205ENST00000533464 OR6V1Q8N148 313 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 CCDC74AQ96AQ1 378 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 UTP23Q9BRU9 249 aaKnown RBP16.12■□□□□ 0.17
PHRF1-205ENST00000533464 FOXQ1Q9C009 403 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 SELENOIQ9C0D9 397 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 NELFAQ9H3P2 528 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 TMEM82A0PJX8 343 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 CAPZBP47756 277 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 POU4F3Q15319 338 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 TSLPQ969D9 159 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 CMSS1Q9BQ75 279 aaKnown RBP16.12■□□□□ 0.17
PHRF1-205ENST00000533464 ACOXLQ9NUZ1 547 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 M0R082 166 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 ATG12O94817 140 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 PAPLNO95428 1278 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 IGHEP01854 428 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 TCRBP04435 133 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 HOXB5P09067 269 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 CX3CR1P49238 355 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 HCCSP53701 268 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 PSPHP78330 225 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 TEKQ02763 1124 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 GLYATL3Q5SZD4 288 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 ZNF585AQ6P3V2 769 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 DCXRQ7Z4W1 244 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 MAFIPQ8WZ33 124 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 COA3Q9Y2R0 106 aaPredicted RBP16.12■□□□□ 0.17
PHRF1-205ENST00000533464 AKR7A3O95154 331 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 P2RX1P51575 399 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 GABREP78334 506 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 PLPP7Q8NBV4 271 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 DNAAF1Q8NEP3 725 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 RAB3CQ96E17 227 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 MRGPRX3Q96LB0 322 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 CSF3RQ99062 836 aa16.12■□□□□ 0.17
PHRF1-205ENST00000533464 GON7Q9BXV9 100 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms