RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 AMDHD2Q9Y303 409 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 TRAV27A0A087WT01 109 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 AKAP8O43823 692 aaKnown RBP15.59■□□□□ 0.09
CLK4-211ENST00000522556 SOD3P08294 240 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 CELA3BP08861 270 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 TSPAN19P0C672 248 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 SEC23BQ15437 767 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 ZNF672Q499Z4 452 aaPredicted RBP15.59■□□□□ 0.09
CLK4-211ENST00000522556 KLHL24Q6TFL4 600 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 CYP2R1Q6VVX0 501 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 SPNS3Q6ZMD2 512 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 ABHD12BQ7Z5M8 362 aaPredicted RBP15.59■□□□□ 0.09
CLK4-211ENST00000522556 BCAS4Q8TDM0 211 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 LIPHQ8WWY8 451 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 BPIFA2Q96DR5 249 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 CLPTM1LQ96KA5 538 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 HS6ST2Q96MM7 605 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 ALPK1Q96QP1 1244 aa15.59■□□□□ 0.09
CLK4-211ENST00000522556 SAMD4AQ9UPU9 718 aaKnown RBP15.59■□□□□ 0.09
CLK4-211ENST00000522556 HEATR1Q9H583 2144 aaKnown RBP15.59■□□□□ 0.09
CLK4-211ENST00000522556 HIVEP1P15822 2718 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 TRBV4-1A0A0J9YWV2 114 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 OR6C65A6NJZ3 312 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 ZNF726A6NNF4 738 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 CDC42EP2O14613 210 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 IGF2P01344 180 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 HIST1H2ABP04908 130 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 B4GALT1P15291 398 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 ZNF26P17031 533 aaPredicted RBP15.58■□□□□ 0.08
CLK4-211ENST00000522556 HOXC12P31275 282 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 CSNK1A1P48729 337 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 CDH11P55287 796 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 PRPS1P60891 318 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 PGGHGQ32M88 737 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 ANKRD16Q6P6B7 361 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 PODNL1Q6PEZ8 512 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 ZNF730Q6ZMV8 503 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 C20orf204Q6ZNR8 217 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 HIST3H2AQ7L7L0 130 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 ZNF611Q8N823 705 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 LRRC75AQ8NAA5 344 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 WFDC11Q8NEX6 87 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 OR6N1Q8NGY5 312 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 SLC7A13Q8TCU3 470 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 ASB10Q8WXI3 467 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 ACOT11Q8WXI4 607 aaPredicted RBP15.58■□□□□ 0.08
CLK4-211ENST00000522556 HIST1H2ACQ93077 130 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 TMEM54Q969K7 222 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 BOD1Q96IK1 185 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 NSMCE2Q96MF7 247 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 ULBP2Q9BZM5 246 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 USF3Q68DE3 2245 aa15.58■□□□□ 0.08
CLK4-211ENST00000522556 IGHV1-18A0A0C4DH31 117 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 ZNF99A8MXY4 864 aaPredicted RBP15.57■□□□□ 0.08
CLK4-211ENST00000522556 E7EQL1 145 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 ATP6V1G2-DDX39BF2Z307 99 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 UBOX5O94941 541 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 DANCRP0C864 163 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 PGA4P0DJD7 388 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 PGA3P0DJD8 388 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 CALB2P22676 271 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 RPS4XP62701 263 aaKnown RBP15.57■□□□□ 0.08
CLK4-211ENST00000522556 MYBPC1Q00872 1141 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 MS4A2Q01362 244 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 PRKCDQ05655 676 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 TOP3AQ13472 1001 aaPredicted RBP15.57■□□□□ 0.08
CLK4-211ENST00000522556 FGD3Q5JSP0 725 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 LRFN4Q6PJG9 635 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 TMEM108Q6UXF1 575 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 CLDN22Q8N7P3 220 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 OR52J3Q8NH60 311 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 OR51A7Q8NH64 312 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 OR6X1Q8NH79 312 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 PERPQ96FX8 193 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 PYURFQ96I23 114 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 ZNF347Q96SE7 839 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 FUZQ9BT04 418 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 INIPQ9NRY2 104 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 ZNF224Q9NZL3 707 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 LAMP3Q9UQV4 416 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 HIF3AQ9Y2N7 669 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 MAGED1Q9Y5V3 778 aaPredicted RBP15.57■□□□□ 0.08
CLK4-211ENST00000522556 PLCE1Q9P212 2302 aa15.57■□□□□ 0.08
CLK4-211ENST00000522556 MED13LQ71F56 2210 aa15.56■□□□□ 0.08
CLK4-211ENST00000522556 ARPC4-TTLL3A0A0A6YYG9 625 aa15.56■□□□□ 0.08
CLK4-211ENST00000522556 IGKV1D-43A0A0B4J1Z2 117 aa15.56■□□□□ 0.08
CLK4-211ENST00000522556 H1F0P07305 194 aaKnown RBP15.56■□□□□ 0.08
CLK4-211ENST00000522556 SAGP10523 405 aaPredicted RBP15.56■□□□□ 0.08
CLK4-211ENST00000522556 PTAFRP25105 342 aa15.56■□□□□ 0.08
CLK4-211ENST00000522556 SH3BGRP55822 239 aaPredicted RBP15.56■□□□□ 0.08
CLK4-211ENST00000522556 ADAM8P78325 824 aa15.56■□□□□ 0.08
CLK4-211ENST00000522556 SLC22A25Q6T423 547 aa15.56■□□□□ 0.08
CLK4-211ENST00000522556 MBOAT2Q6ZWT7 520 aa15.56■□□□□ 0.08
CLK4-211ENST00000522556 SYT14Q8NB59 555 aa15.56■□□□□ 0.08
CLK4-211ENST00000522556 MAGEE2Q8TD90 523 aaPredicted RBP15.56■□□□□ 0.08
CLK4-211ENST00000522556 HDAC2Q92769 488 aaKnown RBP15.56■□□□□ 0.08
CLK4-211ENST00000522556 FBXW5Q969U6 566 aa15.56■□□□□ 0.08
CLK4-211ENST00000522556 SLC25A44Q96H78 314 aaPredicted RBP15.56■□□□□ 0.08
CLK4-211ENST00000522556 FAM46AQ96IP4 442 aaKnown RBP15.56■□□□□ 0.08
CLK4-211ENST00000522556 LRR1Q96L50 414 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms