RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 OR52A5Q9H2C5 316 aa14.96□□□□□ -0.02
PCDHA3-201ENST00000522353 FKRPQ9H9S5 495 aa14.96□□□□□ -0.02
PCDHA3-201ENST00000522353 DOK2O60496 412 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 CSO75390 466 aaKnown RBP14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 CPT2P23786 658 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 HTR2BP41595 481 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 CCL4L1Q8NHW4 92 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 MFFQ9GZY8 342 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 WSB2Q9NYS7 404 aaPredicted RBP14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 MRPS28Q9Y2Q9 187 aaKnown RBP14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 DDX60Q8IY21 1712 aaKnown RBP14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 ZNF732B4DXR9 585 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 GABRPO00591 440 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 HPGDSO60760 199 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 GK2Q14410 553 aaPredicted RBP14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 DUSP7Q16829 419 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 LTC4SQ16873 150 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 LCN10Q6JVE6 187 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 PM20D2Q8IYS1 436 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 ZBTB8AQ96BR9 441 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 AP1S3Q96PC3 154 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 NHSL1Q5SYE7 1610 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 CEACAM5P06731 702 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 THBS1P07996 1170 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 ELAVL4P26378 380 aaKnown RBP14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 HTR2CP28335 458 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 COX20Q5RI15 118 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 PRAMEF9Q5VWM5 478 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 LILRA2Q8N149 483 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 C12orf45Q8N5I9 185 aaPredicted RBP14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 TMEM255BQ8WV15 326 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 A0A1W2PQ09 198 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 AKR7A3O95154 331 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 GABRA5P31644 462 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 MPLP40238 635 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 CAV3P56539 151 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 SLC14A1Q13336 389 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 TBPL2Q6SJ96 375 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 Q6ZS52 159 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 LINC00346Q8IVM7 164 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 EXD3Q8N9H8 876 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 RAB3CQ96E17 227 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 TEX101Q9BY14 249 aa14.95□□□□□ -0.02
PCDHA3-201ENST00000522353 A0A1W2PR48 441 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 MEIS3P1A6NDR6 274 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 BTBD17A6NE02 478 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 ENSAO43768 121 aaKnown RBP14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 AADACL3Q5VUY0 350 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 LPCAT3Q6P1A2 487 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 SPRED1Q7Z699 444 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 SLC22A24Q8N4F4 322 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 OR4M1Q8NGD0 313 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 SGPP1Q9BX95 441 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 C20orf27Q9GZN8 174 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 MED20Q9H944 212 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 BET1O15155 118 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 SGCEO43556 437 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 PGFP49763 221 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 MEP1BQ16820 701 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 ELP2Q6IA86 826 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 DESI1Q6ICB0 168 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 HSD17B8Q92506 261 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 LINC00615Q96LM1 132 aaPredicted RBP14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 BARHL1Q9BZE3 327 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 MMP28Q9H239 520 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 GLTPQ9NZD2 209 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 TRGV8A0A0C4DH27 118 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 A0A1B0GV50 99 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 FGF17O60258 216 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 NR4A2P43354 598 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 EDDM3BP56851 147 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 RPL27P61353 136 aaKnown RBP14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 BLOC1S1P78537 153 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 DMBX1Q8NFW5 382 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 C8orf44Q96CB5 159 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 PPA2Q9H2U2 334 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 NRAPQ86VF7 1730 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 CRYAAP02489 173 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 TRA2AQ13595 282 aaKnown RBP eCLIP14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 GLYR1Q49A26 553 aaPredicted RBP14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 OR2G6Q5TZ20 316 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 CD163Q86VB7 1156 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 ST8SIA1Q92185 356 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 STMND1H3BQB6 276 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 SPINT2O43291 252 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 IGFBP6P24592 240 aaPredicted RBP14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 SLC6A12P48065 614 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 ZNF136P52737 540 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 SNRPD2P62316 118 aaKnown RBP14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 ARHGAP11BQ3KRB8 267 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 UBE2NLQ5JXB2 153 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 FCRLAQ7L513 359 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 KCNE4Q8WWG9 221 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 NOX3Q9HBY0 568 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 CHST11Q9NPF2 352 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 ZNF355PQ9NSJ1 428 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 TMEM30AQ9NV96 361 aa14.94□□□□□ -0.02
PCDHA3-201ENST00000522353 PAPPA2Q9BXP8 1791 aa14.93□□□□□ -0.02
PCDHA3-201ENST00000522353 A0A1W2PPV4 95 aa14.93□□□□□ -0.02
PCDHA3-201ENST00000522353 HTR1FP30939 366 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms