RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 HMGA2P52926 109 aa12.8□□□□□ -0.36
SNF8-212ENST00000514089 MICAQ29983 383 aa12.8□□□□□ -0.36
SNF8-212ENST00000514089 TIMM23BQ5SRD1 257 aa12.8□□□□□ -0.36
SNF8-212ENST00000514089 SSX8Q7RTT4 187 aa12.8□□□□□ -0.36
SNF8-212ENST00000514089 ZER1Q7Z7L7 766 aa12.8□□□□□ -0.36
SNF8-212ENST00000514089 SYT14Q8NB59 555 aa12.8□□□□□ -0.36
SNF8-212ENST00000514089 OR52N5Q8NH56 324 aa12.8□□□□□ -0.36
SNF8-212ENST00000514089 C14orf79Q96F83 325 aa12.8□□□□□ -0.36
SNF8-212ENST00000514089 RBP7Q96R05 134 aa12.8□□□□□ -0.36
SNF8-212ENST00000514089 ZNF346Q9UL40 294 aaKnown RBP12.8□□□□□ -0.36
SNF8-212ENST00000514089 LYVE1Q9Y5Y7 322 aa12.8□□□□□ -0.36
SNF8-212ENST00000514089 COL12A1Q99715 3063 aa12.8□□□□□ -0.36
SNF8-212ENST00000514089 DOPEY1Q5JWR5 2465 aa12.8□□□□□ -0.36
SNF8-212ENST00000514089 A0A096LPE4 126 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 A0A1W2PPZ6 126 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 A6NIZ1 184 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 OR5H1A6NKK0 313 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 A6NNC1 897 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 NR2C1P13056 603 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 ACADSP16219 412 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 COX5AP20674 150 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 NOS3P29474 1203 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 CAPZA2P47755 286 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 SH3BGRP55822 239 aaPredicted RBP12.79□□□□□ -0.36
SNF8-212ENST00000514089 RAP1BP61224 184 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 RPL27P61353 136 aaKnown RBP12.79□□□□□ -0.36
SNF8-212ENST00000514089 RAP1AP62834 184 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 ERVK-25P63136 954 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 CD47Q08722 323 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 GK3PQ14409 553 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 DAZAP2Q15038 168 aaPredicted RBP12.79□□□□□ -0.36
SNF8-212ENST00000514089 PPA1Q15181 289 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 CEACAM16Q2WEN9 425 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 SMARCD3Q6STE5 483 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 AQP11Q8NBQ7 271 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 ACBD4Q8NC06 268 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 C1orf162Q8NEQ5 155 aaPredicted RBP12.79□□□□□ -0.36
SNF8-212ENST00000514089 GIPC3Q8TF64 312 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 PIK3IP1Q96FE7 263 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 MUS81Q96NY9 551 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 KATNB1Q9BVA0 655 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 TXNIPQ9H3M7 391 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 ZNF556Q9HAH1 456 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 GPR35Q9HC97 309 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 GLTPQ9NZD2 209 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 DNAJB9Q9UBS3 223 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 IL20RAQ9UHF4 553 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 AP4S1Q9Y587 144 aa12.79□□□□□ -0.36
SNF8-212ENST00000514089 KIAA1549Q9HCM3 1950 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 ARHGEF9O43307 516 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 ENTPD5O75356 428 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 DEAF1O75398 565 aaPredicted RBP12.78□□□□□ -0.36
SNF8-212ENST00000514089 TIPRLO75663 272 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 WNT11O96014 354 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 GASTP01350 101 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 CD14P08571 375 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 ITGA5P08648 1049 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 QDPRP09417 244 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 FPR3P25089 353 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 SLC6A6P31641 620 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 CCKARP32238 428 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 ZNF84P51523 738 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 RPS6KA3P51812 740 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 FOXG1P55316 489 aaPredicted RBP12.78□□□□□ -0.36
SNF8-212ENST00000514089 RPS4XP62701 263 aaKnown RBP12.78□□□□□ -0.36
SNF8-212ENST00000514089 ARF1P84077 181 aaKnown RBP12.78□□□□□ -0.36
SNF8-212ENST00000514089 TSPAN31Q12999 210 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 TAB1Q15750 504 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 GABRA6Q16445 453 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 FAM205BPQ63HN1 556 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 C1orf94Q6P1W5 598 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 ANKRD16Q6P6B7 361 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 KLHL17Q6TDP4 642 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 ZNF295-AS1Q8N0V1 137 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 TMEM123Q8N131 208 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 C17orf78Q8N4C9 275 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 OR10G2Q8NGC3 310 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 OR9Q2Q8NGE9 314 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 FANK1Q8TC84 345 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 ASB10Q8WXI3 467 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 GTPBP3Q969Y2 492 aaKnown RBP12.78□□□□□ -0.36
SNF8-212ENST00000514089 FUZQ9BT04 418 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 IFT27Q9BW83 186 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 C1QTNF6Q9BXI9 259 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 CLEC4MQ9H2X3 399 aaPredicted RBP12.78□□□□□ -0.36
SNF8-212ENST00000514089 ESRP2Q9H6T0 727 aaKnown RBP12.78□□□□□ -0.36
SNF8-212ENST00000514089 PDP1Q9P0J1 537 aaPredicted RBP12.78□□□□□ -0.36
SNF8-212ENST00000514089 MGAT4BQ9UQ53 548 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 BAHCC1Q9P281 2608 aa12.78□□□□□ -0.36
SNF8-212ENST00000514089 PHF3Q92576 2039 aaKnown RBP12.78□□□□□ -0.36
SNF8-212ENST00000514089 A0A1W2PR80 420 aa12.77□□□□□ -0.37
SNF8-212ENST00000514089 PTP4A3O75365 173 aa12.77□□□□□ -0.37
SNF8-212ENST00000514089 TRMUO75648 421 aaKnown RBP12.77□□□□□ -0.37
SNF8-212ENST00000514089 FCGR1AP12314 374 aa12.77□□□□□ -0.37
SNF8-212ENST00000514089 GSTM3P21266 225 aa12.77□□□□□ -0.37
SNF8-212ENST00000514089 CRYGSP22914 178 aa12.77□□□□□ -0.37
SNF8-212ENST00000514089 FASP25445 335 aa12.77□□□□□ -0.37
SNF8-212ENST00000514089 LIMS1P48059 325 aa12.77□□□□□ -0.37
SNF8-212ENST00000514089 NR1H2P55055 460 aa12.77□□□□□ -0.37
SNF8-212ENST00000514089 GABPB1Q06547 395 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms