RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	CRH	P06850	196 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	OR3A2	P47893	321 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	LCN6	P62502	163 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	TFF3	Q07654	80 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	SNTB1	Q13884	538 aa	Known RBP	12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	C1D	Q13901	141 aa	Known RBP	12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	SLC36A3	Q495N2	470 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	MEST	Q5EB52	335 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	TMEM201	Q5SNT2	666 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	CASP12	Q6UXS9	341 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	C22orf34	Q6ZV56	151 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	LUZP2	Q86TE4	346 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	SVOPL	Q8N434	492 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	LINC00471	Q8N535	108 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	ATG16L2	Q8NAA4	619 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	ANKK1	Q8NFD2	765 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	LILRB4	Q8NHJ6	448 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	NMD3	Q96D46	503 aa	Known RBP	12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	ZFP3	Q96NJ6	502 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	MBOAT4	Q96T53	435 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	TXNIP	Q9H3M7	391 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	GP6	Q9HCN6	339 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	GLRX2	Q9NS18	164 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	IL20	Q9NYY1	176 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	STX18	Q9P2W9	335 aa	Known RBP	12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	MYO9A	B2RTY4	2548 aa		12.85	□□□□□ -0.35
MATR3-238	ENST00000512107	TEX13C	A0A0J9YWL9	993 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107		A8MXE2	369 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.84	□□□□□ -0.35	9e-8	■■■■□ 20.7
MATR3-238	ENST00000512107	ALPL	P05186	524 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	CD14	P08571	375 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	ANXA8	P13928	327 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	CHRNB4	P30926	498 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	IFNGR2	P38484	337 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	CDKN2A	P42771	156 aa	Known RBP	12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	RPL27	P61353	136 aa	Known RBP	12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	MYBPC1	Q00872	1141 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	DAG1	Q14118	895 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	LRRC36	Q1X8D7	754 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	GTF2IRD2B	Q6EKJ0	949 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	LRFN4	Q6PJG9	635 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	GTF2IRD2	Q86UP8	949 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	ZDHHC13	Q8IUH4	622 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	C20orf196	Q8IYI0	205 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	C10orf67	Q8IYJ2	551 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	HTRA1	Q92743	480 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	TMEM54	Q969K7	222 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	DDO	Q99489	341 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	TSSK6	Q9BXA6	273 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	MRPL13	Q9BYD1	178 aa	Known RBP	12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	RNPEPL1	Q9HAU8	725 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	USE1	Q9NZ43	259 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	ZNF629	Q9UEG4	869 aa	Predicted RBP	12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	FOXD3	Q9UJU5	478 aa	Predicted RBP	12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	PROCR	Q9UNN8	238 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	EMC9	Q9Y3B6	208 aa		12.84	□□□□□ -0.35
MATR3-238	ENST00000512107	EEF1E1-BLOC1S5	C9J1V9	151 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107		M0R129	80 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	GPR171	O14626	319 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	CASQ2	O14958	399 aa	Predicted RBP	12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	EEF1E1	O43324	174 aa	Known RBP	12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	MRPL33	O75394	65 aa	Known RBP	12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	ATP6V1G2	O95670	118 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	CLDN1	O95832	211 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	ITGA5	P08648	1049 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	PGA4	P0DJD7	388 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	PGA3	P0DJD8	388 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	CD8B	P10966	210 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	OSM	P13725	252 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	IGHV1-2	P23083	117 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	CCKAR	P32238	428 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	OPRM1	P35372	400 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	RPL4	P36578	427 aa	Known RBP	12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	ACVR1B	P36896	505 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	FMOD	Q06828	376 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	FAM27E3	Q08E93	113 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	ZIK1	Q3SY52	487 aa	Predicted RBP	12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	SLC35F1	Q5T1Q4	408 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	OGFRL1	Q5TC84	451 aa	Predicted RBP	12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	C9orf135	Q5VTT2	229 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	DPY19L2P2	Q6ZN68	376 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	GABRG1	Q8N1C3	465 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	SYT14	Q8NB59	555 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	OR6X1	Q8NH79	312 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	MAGEE2	Q8TD90	523 aa	Predicted RBP	12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	ZNRF4	Q8WWF5	429 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	ERMAP	Q96PL5	475 aa	Predicted RBP	12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	POLDIP3	Q9BY77	421 aa	Known RBP	12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	FN3K	Q9H479	309 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	KRCC1	Q9NPI7	259 aa	Predicted RBP	12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	PAPOLB	Q9NRJ5	636 aa	Known RBP	12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	EMC3	Q9P0I2	261 aa		12.83	□□□□□ -0.36
MATR3-238	ENST00000512107	CACNA1C	Q13936	2221 aa		12.82	□□□□□ -0.36
MATR3-238	ENST00000512107	SPTAN1	Q13813	2472 aa	Known RBP	12.82	□□□□□ -0.36
MATR3-238	ENST00000512107	DCTN6	O00399	190 aa		12.82	□□□□□ -0.36
MATR3-238	ENST00000512107	AGFG2	O95081	481 aa		12.82	□□□□□ -0.36
MATR3-238	ENST00000512107	TXNDC12	O95881	172 aa		12.82	□□□□□ -0.36
MATR3-238	ENST00000512107	BCL10	O95999	233 aa		12.82	□□□□□ -0.36
MATR3-238	ENST00000512107	SCG5	P05408	212 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms