RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 BHLHA15Q7RTS1 189 aaPredicted RBP4.65□□□□□ -1.66
PHF3-210ENST00000509876 ST7LQ8TDW4 575 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 MUS81Q96NY9 551 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 SLCO5A1Q9H2Y9 848 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 GPN1Q9HCN4 374 aaPredicted RBP4.65□□□□□ -1.66
PHF3-210ENST00000509876 TNFRSF12AQ9NP84 129 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 MAN2C1Q9NTJ4 1040 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 COMMD9Q9P000 198 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 HRH3Q9Y5N1 445 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 TSC2P49815 1807 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 CDHR4A6H8M9 788 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 YES1P07947 543 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 NR4A1P22736 598 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 CASP3P42574 277 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 GABRA2P47869 451 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 ZFP36L2P47974 494 aaKnown RBP4.65□□□□□ -1.66
PHF3-210ENST00000509876 MS4A2Q01362 244 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 ZFP36L1Q07352 338 aaKnown RBP4.65□□□□□ -1.66
PHF3-210ENST00000509876 CLN3Q13286 438 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 ASCL5Q7RTU5 278 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 RIMKLAQ8IXN7 391 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 C9orf40Q8IXQ3 194 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 POC5Q8NA72 575 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 NOXO1Q8NFA2 376 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 ACOT12Q8WYK0 555 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 GCDHQ92947 438 aaPredicted RBP4.65□□□□□ -1.66
PHF3-210ENST00000509876 FOXRED1Q96CU9 486 aaPredicted RBP4.65□□□□□ -1.66
PHF3-210ENST00000509876 ZNF582Q96NG8 517 aaPredicted RBP4.65□□□□□ -1.66
PHF3-210ENST00000509876 NMNAT3Q96T66 252 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 ARHGDIGQ99819 225 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 GINS4Q9BRT9 223 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 TXNIPQ9H3M7 391 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 CRLF2Q9HC73 371 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 SMURF1Q9HCE7 757 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 STSP08842 583 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 CCL3P10147 92 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 SDHAP31040 664 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 MAP2K3P46734 347 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 RGS6P49758 472 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 IDH3GP51553 393 aaPredicted RBP4.65□□□□□ -1.67
PHF3-210ENST00000509876 SPIN3Q5JUX0 258 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 ZNF773Q6PK81 442 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 TMEM108Q6UXF1 575 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 MKXQ8IYA7 352 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 RAB2BQ8WUD1 216 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 HPS1Q92902 700 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 RTL8AQ9BWD3 113 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 C1QTNF6Q9BXI9 259 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 GPATCH2Q9NW75 528 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 ERRFI1Q9UJM3 462 aaPredicted RBP4.65□□□□□ -1.67
PHF3-210ENST00000509876 OSGIN1Q9UJX0 560 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 HHLA2Q9UM44 414 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 VWA8A3KMH1 1905 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 LTBP2Q14767 1821 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 A0A1B0GTH9 108 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 CCRL2O00421 344 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 CD3EP07766 207 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 CELP19835 753 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 CXCR4P61073 352 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 ROR2Q01974 943 aaKnown RBP4.65□□□□□ -1.67
PHF3-210ENST00000509876 DUSP2Q05923 314 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 OLFML2AQ68BL7 652 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 RGS7BPQ6MZT1 257 aaPredicted RBP4.65□□□□□ -1.67
PHF3-210ENST00000509876 LACC1Q8IV20 430 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 C1orf87Q8N0U7 546 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 GCNT2Q8N0V5 402 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 TRMT61AQ96FX7 289 aaKnown RBP4.65□□□□□ -1.67
PHF3-210ENST00000509876 VSTM2LQ96N03 204 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 TMEM43Q9BTV4 400 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 WDR12Q9GZL7 423 aaKnown RBP4.65□□□□□ -1.67
PHF3-210ENST00000509876 SYT4Q9H2B2 425 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 ABCB9Q9NP78 766 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 ENY2Q9NPA8 101 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 NUFIP1Q9UHK0 495 aaKnown RBP4.65□□□□□ -1.67
PHF3-210ENST00000509876 HS3ST3B1Q9Y662 390 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 SLCO1B1Q9Y6L6 691 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 IGKV1-8A0A0C4DH67 115 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 CCDC182A6NF36 153 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 TUBAL3A6NHL2 446 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 SLC22A1O15245 554 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 SCGB2A1O75556 95 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 RLN1P04808 185 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 ACKR1Q16570 336 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 CHRFAM7AQ494W8 412 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 ATP1A1-AS1Q5TC04 95 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 SPNS2Q8IVW8 549 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 LANCL2Q9NS86 450 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 DNAJB12Q9NXW2 375 aaKnown RBP4.65□□□□□ -1.67
PHF3-210ENST00000509876 VSX1Q9NZR4 365 aaPredicted RBP4.65□□□□□ -1.67
PHF3-210ENST00000509876 KCNS2Q9ULS6 477 aa4.65□□□□□ -1.67
PHF3-210ENST00000509876 A0A096LPE4 126 aa4.64□□□□□ -1.67
PHF3-210ENST00000509876 A0A1W2PPZ6 126 aa4.64□□□□□ -1.67
PHF3-210ENST00000509876 WRBO00258 174 aa4.64□□□□□ -1.67
PHF3-210ENST00000509876 NME2P1O60361 137 aa4.64□□□□□ -1.67
PHF3-210ENST00000509876 GLCEO94923 617 aa4.64□□□□□ -1.67
PHF3-210ENST00000509876 GYPBP06028 91 aa4.64□□□□□ -1.67
PHF3-210ENST00000509876 NME2P22392 152 aa4.64□□□□□ -1.67
PHF3-210ENST00000509876 LAP3P28838 519 aa4.64□□□□□ -1.67
PHF3-210ENST00000509876 ARRB2P32121 409 aa4.64□□□□□ -1.67
PHF3-210ENST00000509876 CFHR1Q03591 330 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms