RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 PLGP00747 810 aaPredicted RBP9.88□□□□□ -0.83
PROM1-207ENST00000508167 RAB40BQ12829 278 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 ZNF79Q15937 498 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 ZNF404Q494X3 552 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 GLYR1Q49A26 553 aaPredicted RBP9.88□□□□□ -0.83
PROM1-207ENST00000508167 C1orf140Q5VVS0 124 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 ZNF585AQ6P3V2 769 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 GTPBP8Q8N3Z3 284 aaPredicted RBP9.88□□□□□ -0.83
PROM1-207ENST00000508167 SLC25A43Q8WUT9 341 aaPredicted RBP9.88□□□□□ -0.83
PROM1-207ENST00000508167 SNRNP27Q8WVK2 155 aaKnown RBP9.88□□□□□ -0.83
PROM1-207ENST00000508167 FRMD6Q96NE9 622 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 TEX12Q9BXU0 123 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 UBQLN3Q9H347 655 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 RPL36Q9Y3U8 105 aaKnown RBP9.88□□□□□ -0.83
PROM1-207ENST00000508167 SIRT4Q9Y6E7 314 aaPredicted RBP9.88□□□□□ -0.83
PROM1-207ENST00000508167 IGKV1D-42A0A075B6H8 117 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 A0A087WUJ7 227 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 C11orf98E9PRG8 122 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 GAAP10253 952 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 CARD18P57730 90 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 HSF1Q00613 529 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 TPBGQ13641 420 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 C1DQ13901 141 aaKnown RBP9.88□□□□□ -0.83
PROM1-207ENST00000508167 C3AR1Q16581 482 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 HBMQ6B0K9 141 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 ARHGAP11AQ6P4F7 1023 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 ADGRG3Q86Y34 549 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 ANKK1Q8NFD2 765 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 ZNRF4Q8WWF5 429 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 MND1Q9BWT6 205 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 MIXL1Q9H2W2 232 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 MMP27Q9H306 513 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 ISYNA1Q9NPH2 558 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 TMEM5Q9Y2B1 443 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 CDH10Q9Y6N8 788 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 A0A1B0GTH9 108 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 TMEM72A0PK05 275 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 ZC3H12DA2A288 527 aaKnown RBP9.88□□□□□ -0.83
PROM1-207ENST00000508167 ZNF670-ZNF695F2Z2N8 137 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 APOL3O95236 402 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 RAB36O95755 333 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 PER3P56645 1201 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 RBPJQ06330 500 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 DGUOKQ16854 277 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 SHFQ7M4L6 423 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 OR52L1Q8NGH7 329 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 KLHL15Q96M94 604 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 NPAS1Q99742 590 aa9.88□□□□□ -0.83
PROM1-207ENST00000508167 FUOMA2VDF0 154 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 LRRN3E7EW58 273 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 TNFSF11O14788 317 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 ZNHIT1O43257 154 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 ZIC3O60481 467 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 SPNP16150 400 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 IL11P20809 199 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 ADH6P28332 368 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 INAQ16352 499 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 RNFT1Q5M7Z0 435 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 MAMDC2Q7Z304 686 aaPredicted RBP9.87□□□□□ -0.83
PROM1-207ENST00000508167 LNX2Q8N448 690 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 RNFT2Q96EX2 444 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 PCDHGB6Q9Y5F9 930 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 EML6Q6ZMW3 1958 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 hCG_2014768A0A024R1R8 64 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 CXCL13O43927 109 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 RAC1P63000 192 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 CSNK2A1P68400 391 aaPredicted RBP9.87□□□□□ -0.83
PROM1-207ENST00000508167 MED22Q15528 200 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 CLEC12AQ5QGZ9 265 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 C1QL3Q5VWW1 255 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 NIPAL3Q6P499 406 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 ATG4DQ86TL0 474 aaPredicted RBP9.87□□□□□ -0.83
PROM1-207ENST00000508167 GHDCQ8N2G8 530 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 PARP16Q8N5Y8 322 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 OSTF1Q92882 214 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 ARL5BQ96KC2 179 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 TAAR6Q96RI8 345 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 CHCHD6Q9BRQ6 235 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 WDR12Q9GZL7 423 aaKnown RBP9.87□□□□□ -0.83
PROM1-207ENST00000508167 ASF1BQ9NVP2 202 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 A0A075B6Q4 140 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 TRAV36DV7A0A075B6V5 113 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 IGLV3-32A0A0A0MS00 114 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 MCIDASD6RGH6 385 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 NOL3O60936 208 aaKnown RBP9.87□□□□□ -0.83
PROM1-207ENST00000508167 HTR1FP30939 366 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 PTGS2P35354 604 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 PPP5CP53041 499 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 CASP6P55212 293 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 CLDN15P56746 228 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 RPS4XP62701 263 aaKnown RBP9.87□□□□□ -0.83
PROM1-207ENST00000508167 RPS25P62851 125 aaKnown RBP9.87□□□□□ -0.83
PROM1-207ENST00000508167 FABP5Q01469 135 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 INSL4Q14641 139 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 KTI12Q96EK9 354 aaPredicted RBP9.87□□□□□ -0.83
PROM1-207ENST00000508167 SOSTQ9BQB4 213 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 RACGAP1Q9H0H5 632 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 MCTS1Q9ULC4 181 aaKnown RBP9.87□□□□□ -0.83
PROM1-207ENST00000508167 MPDZO75970 2070 aa9.87□□□□□ -0.83
PROM1-207ENST00000508167 ZFYVE26Q68DK2 2539 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms