RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 GCNT2Q8N0V5 402 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 TMEM123Q8N131 208 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 GPR137CQ8N3F9 429 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 ARIH2OSQ8N7S6 290 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 ZIC4Q8N9L1 334 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 IL17RDQ8NFM7 739 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 KISS1RQ969F8 398 aaPredicted RBP7.49□□□□□ -1.21
PDGFC-205ENST00000506880 RADILQ96JH8 1075 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 MUS81Q96NY9 551 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 RBP7Q96R05 134 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 MRPL13Q9BYD1 178 aaKnown RBP7.49□□□□□ -1.21
PDGFC-205ENST00000506880 NRIP3Q9NQ35 241 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 UPB1Q9UBR1 384 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 SH3BGRL2Q9UJC5 107 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 FBXO9Q9UK97 447 aaPredicted RBP7.49□□□□□ -1.21
PDGFC-205ENST00000506880 POFUT2Q9Y2G5 429 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 AMDHD2Q9Y303 409 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 TESMINQ9Y4I5 508 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 CDH10Q9Y6N8 788 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 FLNBO75369 2602 aaKnown RBP7.48□□□□□ -1.21
PDGFC-205ENST00000506880 ASH1LQ9NR48 2969 aaKnown RBP7.48□□□□□ -1.21
PDGFC-205ENST00000506880 ARPC4-TTLL3A0A0A6YYG9 625 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 TRBV4-1A0A0J9YWV2 114 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF99A8MXY4 864 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-205ENST00000506880 MCIDASD6RGH6 385 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 BLOC1S5-TXNDC5H3BN57 136 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 XKRYO14609 159 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 KRT33AO76009 404 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 WNT11O96014 354 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 HMGN1P05114 100 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 CBLP22681 906 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 AHCYP23526 432 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 CRABP1P29762 137 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 SSTR2P30874 369 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 HOXC12P31275 282 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 UGT2B10P36537 528 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 POU3F1Q03052 451 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-205ENST00000506880 FOXF2Q12947 444 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 CCNIQ14094 377 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 EXOC3L2Q2M3D2 409 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 ARMC4Q5T2S8 1044 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 HMBOX1Q6NT76 420 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 PPP4R4Q6NUP7 873 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 PGBD2Q6P3X8 592 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 FAHD1Q6P587 224 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 ANKRD16Q6P6B7 361 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 C3P1Q6ZMU1 363 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 FAM122BQ7Z309 247 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 SYT9Q86SS6 491 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 CCDC71Q8IV32 467 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-205ENST00000506880 CCDC103Q8IW40 242 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 LNX2Q8N448 690 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 RPRMLQ8N4K4 120 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 LRRC75AQ8NAA5 344 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 OR10G2Q8NGC3 310 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 PFN4Q8NHR9 129 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 ASB10Q8WXI3 467 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 NANOS1Q8WY41 292 aaKnown RBP7.48□□□□□ -1.21
PDGFC-205ENST00000506880 TMEM54Q969K7 222 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 ITFG2Q969R8 447 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 MUCL1Q96DR8 90 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 OR2M2Q96R28 347 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 RBM4BQ9BQ04 359 aaKnown RBP7.48□□□□□ -1.21
PDGFC-205ENST00000506880 RBM4Q9BWF3 364 aaKnown RBP7.48□□□□□ -1.21
PDGFC-205ENST00000506880 PRR14Q9BWN1 585 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 C1orf198Q9H425 327 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 C20orf141Q9NUB4 165 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 GALNT8Q9NY28 637 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 GRHPRQ9UBQ7 328 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 ATPIF1Q9UII2 106 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 KCNG2Q9UJ96 466 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 KLHL21Q9UJP4 597 aa7.48□□□□□ -1.21
PDGFC-205ENST00000506880 SLC35F4A4IF30 521 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 TUBAL3A6NHL2 446 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 G3V2T6 193 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 SMNDC1O75940 238 aaKnown RBP eCLIP7.47□□□□□ -1.21
PDGFC-205ENST00000506880 FARS2O95363 451 aaKnown RBP7.47□□□□□ -1.21
PDGFC-205ENST00000506880 HPRP00739 348 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 PTHP01270 115 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 IFNGP01579 166 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 OPN1LWP04000 364 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 PGA4P0DJD7 388 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 PGA3P0DJD8 388 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 IFNGR1P15260 489 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 ACADSP16219 412 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 MAKP20794 623 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 IL32P24001 234 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 YAP1P46937 504 aaKnown RBP7.47□□□□□ -1.21
PDGFC-205ENST00000506880 CSNK1A1P48729 337 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF84P51523 738 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 CLDN17P56750 224 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 FHL1Q13642 323 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 SEC23BQ15437 767 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 VWA1Q6PCB0 445 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF474Q6S9Z5 364 aaPredicted RBP7.47□□□□□ -1.21
PDGFC-205ENST00000506880 KLHL24Q6TFL4 600 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 STAC2Q6ZMT1 411 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 LIX1LQ8IVB5 337 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 PACRGLQ8N7B6 248 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF433Q8N7K0 673 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms