RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	OR2W1	Q9Y3N9	320 aa		4.11	□□□□□ -1.75
CCDC66-222	ENST00000494672	ARL5A	Q9Y689	179 aa		4.11	□□□□□ -1.75
CCDC66-222	ENST00000494672	ADGRA3	Q8IWK6	1321 aa		4.11	□□□□□ -1.75
CCDC66-222	ENST00000494672	PTPRU	Q92729	1446 aa		4.11	□□□□□ -1.75
CCDC66-222	ENST00000494672	ANKRD50	Q9ULJ7	1429 aa		4.11	□□□□□ -1.75
CCDC66-222	ENST00000494672	TRAPPC8	Q9Y2L5	1435 aa		4.11	□□□□□ -1.75
CCDC66-222	ENST00000494672	DISP1	Q96F81	1524 aa		4.11	□□□□□ -1.75
CCDC66-222	ENST00000494672	KCNE1B	A0A087WTH5	132 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	C13orf42	A0A1B0GVH6	325 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	CCDC182	A6NF36	153 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	SDR42E2	A6NKP2	422 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	GJE1	A6NN92	205 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	IMPA2	O14732	288 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	SNAI2	O43623	268 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	PCDH7	O60245	1069 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	RAD1	O60671	282 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	RNASEH1	O60930	286 aa	Known RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	UPK3A	O75631	287 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	OR2J2	O76002	312 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	KRT33A	O76009	404 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	CELF2	O95319	508 aa	Known RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	PSMG1	O95456	288 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	FADS2	O95864	444 aa	Known RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	TBX6	O95947	436 aa	Predicted RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	FGG	P02679	453 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	HTR1A	P08908	422 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	ZNF883	P0CG24	379 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	ANXA3	P12429	323 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	MYOG	P15173	224 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	ITGA3	P26006	1051 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	SDC4	P31431	198 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	PTEN	P60484	403 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	ISL1	P61371	349 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	RPL19	P84098	196 aa	Known RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	DHODH	Q02127	395 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	RGS1	Q08116	209 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	AES	Q08117	197 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	TWF1	Q12792	350 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	GAGE5	Q13069	117 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	GAGE6	Q13070	117 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	GRAP	Q13588	217 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	APOF	Q13790	326 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	GPNMB	Q14956	572 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	PTGES3	Q15185	160 aa	Known RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	OR8G1	Q15617	311 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	EXT1	Q16394	746 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	RBBP7	Q16576	425 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	MICB	Q29980	383 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	ACSBG2	Q5FVE4	666 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	SLC25A53	Q5H9E4	307 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	SIRPB2	Q5JXA9	342 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	C6orf136	Q5SQH8	315 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	REP15	Q6BDI9	236 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	DCUN1D2	Q6PH85	259 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	PLET1	Q6UQ28	207 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	SCIMP	Q6UWF3	145 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	LINGO4	Q6UY18	593 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	RBMS3	Q6XE24	437 aa	Known RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	CYS1	Q717R9	158 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	GRINA	Q7Z429	371 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	TMEM144	Q7Z5S9	345 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	COMMD7	Q86VX2	200 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	WDFY1	Q8IWB7	410 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672		Q8N402	240 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	TEX26	Q8N6G2	289 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	CLDN22	Q8N7P3	220 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	ZNF383	Q8NA42	475 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	FAM71C	Q8NEG0	241 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	OR2AK2	Q8NG84	335 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	COQ8A	Q8NI60	647 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	PIGX	Q8TBF5	258 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	ZFAND1	Q8TCF1	268 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	CD200R1	Q8TD46	325 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	C1orf54	Q8WWF1	131 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	DNAJB3	Q8WWF6	145 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	PIGT	Q969N2	578 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	LGALS12	Q96DT0	336 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	RAB3C	Q96E17	227 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	PGAM5	Q96HS1	289 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	WDFY2	Q96P53	400 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	TECTB	Q96PL2	329 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	KLF6	Q99612	283 aa	Predicted RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	IL12RB2	Q99665	862 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	EGFL8	Q99944	293 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	RTP3	Q9BQQ7	232 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	VPS25	Q9BRG1	176 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	NXF2	Q9GZY0	626 aa	Known RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	MTHFD2L	Q9H903	347 aa	Predicted RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	ACTR8	Q9H981	624 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	TPT1P8	Q9HAU6	139 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	POPDC2	Q9HBU9	364 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	DDIT4	Q9NX09	232 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	WSB2	Q9NYS7	404 aa	Predicted RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	CNOT2	Q9NZN8	540 aa	Known RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	HSPB7	Q9UBY9	170 aa		4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	PRPF19	Q9UMS4	504 aa	Known RBP	4.1	□□□□□ -1.75
CCDC66-222	ENST00000494672	A4GNT	Q9UNA3	340 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms