RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PLAUP00749 431 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 HTR2AP28223 471 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 LIMS1P48059 325 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 P2RY4P51582 365 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 HMGA2P52926 109 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 PPA1Q15181 289 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 DUSP7Q16829 419 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 SHEQ5VZ18 495 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 COMTD1Q86VU5 262 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 UBE2J2Q8N2K1 259 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 TMEM99Q8N816 258 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 ZNF611Q8N823 705 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 SMYD1Q8NB12 490 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 PIK3C3Q8NEB9 887 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 OR9K2Q8NGE7 335 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 MFSD8Q8NHS3 518 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 AMBRA1Q9C0C7 1298 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 FAM192AQ9GZU8 254 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 DLL4Q9NR61 685 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 PDP1Q9P0J1 537 aaPredicted RBP11.62□□□□□ -0.55
ERCC3-209ENST00000494464 FAM32AQ9Y421 112 aaKnown RBP11.62□□□□□ -0.55
ERCC3-209ENST00000494464 PRR14LQ5THK1 2151 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 ELOA3DA6NLF2 546 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-209ENST00000494464 TRIM64CA6NLI5 447 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 AKR7A3O95154 331 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 IGHV3-9P01782 118 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 CD3EP07766 207 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 ITGA5P08648 1049 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 PNMTP11086 282 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 TNFRSF1BP20333 461 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 OR1E2P47887 323 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 DAPP51397 102 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 RGS8P57771 180 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-209ENST00000494464 TUBA4AP68366 448 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 NKX6-1P78426 367 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-209ENST00000494464 HOXC5Q00444 222 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 SPIBQ01892 262 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 EGR4Q05215 589 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 PPP1R8Q12972 351 aaKnown RBP11.61□□□□□ -0.55
ERCC3-209ENST00000494464 STK11Q15831 433 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 ZIK1Q3SY52 487 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-209ENST00000494464 ELOA3BQ3SY89 546 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 TTC33Q6PID6 262 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-209ENST00000494464 CYP4Z1Q86W10 505 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 C8orf59Q8N0T1 100 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-209ENST00000494464 C1orf162Q8NEQ5 155 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-209ENST00000494464 WFDC11Q8NEX6 87 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 ELOA3Q8NG57 546 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 DNAJA4Q8WW22 397 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-209ENST00000494464 MUCL1Q96DR8 90 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 DHRS1Q96LJ7 313 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 PTDSS2Q9BVG9 487 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 GABARAPL3Q9BY60 117 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 TRIM2Q9C040 744 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 KIF17Q9P2E2 1029 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 RPS6KB2Q9UBS0 482 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 RASD1Q9Y272 281 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 SH3GLB1Q9Y371 365 aa11.61□□□□□ -0.55
ERCC3-209ENST00000494464 A0A1B0GWA3 101 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 E9PQ18 207 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 ARHGEF9O43307 516 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 RAD51DO75771 328 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 CLPTM1O96005 669 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 ANXA8P13928 327 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 FOSL1P15407 271 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 PAX1P15863 534 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 PRKACGP22612 351 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 RIPPLY3P57055 190 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 BSPH1Q075Z2 132 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 FAPQ12884 760 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 ALG10BQ5I7T1 473 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 C1QTNF12Q5T7M4 302 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 TSPO2Q5TGU0 170 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 ZNF691Q5VV52 312 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 OR7E24Q6IFN5 339 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 ALKBH2Q6NS38 261 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 ULK3Q6PHR2 472 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 THAP5Q7Z6K1 395 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 OFCC1Q8IZS5 231 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 ZNF786Q8N393 782 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 C17orf78Q8N4C9 275 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 ZIC4Q8N9L1 334 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 ATG16L2Q8NAA4 619 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 TSPAN14Q8NG11 270 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 OR10G2Q8NGC3 310 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 GIPC3Q8TF64 312 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 AKAP1Q92667 903 aaKnown RBP eCLIP11.6□□□□□ -0.55
ERCC3-209ENST00000494464 ZNF385AQ96PM9 386 aaKnown RBP11.6□□□□□ -0.55
ERCC3-209ENST00000494464 PITX2Q99697 317 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 GSX2Q9BZM3 304 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 SLCO5A1Q9H2Y9 848 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 SLC7A10Q9NS82 523 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 KRT84Q9NSB2 600 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 UPB1Q9UBR1 384 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 SLC13A4Q9UKG4 626 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 HSPE1-MOB4S4R3N1 261 aa11.6□□□□□ -0.55
ERCC3-209ENST00000494464 A0A0B4J2E0 115 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 LOC100130705A0A1B0GUX0 176 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 A0A1B0GX12 115 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 CIB4A0PJX0 185 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms