RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 MALT1Q9UDY8 824 aa11.92□□□□□ -0.5
DNMT3A-214ENST00000491288 SLC7A8Q9UHI5 535 aa11.92□□□□□ -0.5
DNMT3A-214ENST00000491288 NIPBLQ6KC79 2804 aaeCLIP11.92□□□□□ -0.5
DNMT3A-214ENST00000491288 MAP1AP78559 2803 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 TRBV4-1A0A0J9YWV2 114 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 SH3PXD2BA1X283 911 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 TRAF3IP2O43734 574 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 CST1P01037 141 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 F13BP05160 661 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 CD99P14209 185 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 CDH2P19022 906 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 MAKP20794 623 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 IGHV1-2P23083 117 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 EDNRAP25101 427 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 MPGP29372 298 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 HOXC12P31275 282 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 RPL4P36578 427 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 DAP3P51398 398 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 BIDP55957 195 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 CAMK2DQ13557 499 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 TSC22D1Q15714 1073 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 STK11Q15831 433 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 ZBED5Q49AG3 693 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 IQCCQ4KMZ1 466 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 ALG10Q5BKT4 473 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 C1orf146Q5VVC0 180 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 CARD17Q5XLA6 110 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 OR2T5Q6IEZ7 315 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 WFDC8Q8IUA0 241 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 TGIF2LYQ8IUE0 185 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 OR2T29Q8NH02 315 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 CANT1Q8WVQ1 401 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 S100PBPQ96BU1 408 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 FAM46AQ96IP4 442 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 LRR1Q96L50 414 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 DHRS1Q96LJ7 313 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 OR2M2Q96R28 347 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 CHID1Q9BWS9 393 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 ST6GALNAC2Q9UJ37 374 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 VPS13CQ709C8 3753 aa11.91□□□□□ -0.5
DNMT3A-214ENST00000491288 M0R3G1 203 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 CLOCKO15516 846 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 UPK3AO75631 287 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 RAD51DO75771 328 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 ZNF432O94892 652 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 GOSR1O95249 250 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 MAGEA2P43356 314 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 GPR4P46093 362 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 PRRC2AP48634 2157 aaKnown RBP11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 HMGA2P52926 109 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 CTXN1P60606 82 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 LSM11P83369 360 aaKnown RBP eCLIP11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 GK3PQ14409 553 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 FREM1Q5H8C1 2179 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 C9orf135Q5VTT2 229 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 KLHL24Q6TFL4 600 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 MEX3DQ86XN8 651 aaKnown RBP11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 OR6X1Q8NH79 312 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 MOSPD2Q8NHP6 518 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 GNPDA2Q8TDQ7 276 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 ZNF566Q969W8 418 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 MBD6Q96DN6 1003 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 SLC25A44Q96H78 314 aaPredicted RBP11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 POLDIP3Q9BY77 421 aaKnown RBP11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 CLEC4MQ9H2X3 399 aaPredicted RBP11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 LIME1Q9H400 295 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 DLL4Q9NR61 685 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 CCM2LQ9NUG4 571 aaPredicted RBP11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 POFUT2Q9Y2G5 429 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 HIF3AQ9Y2N7 669 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 ACANP16112 2415 aa11.9□□□□□ -0.5
DNMT3A-214ENST00000491288 AKAP6Q13023 2319 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 TRAV27A0A087WT01 109 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 UNC119BA6NIH7 251 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 A6NNC1 897 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 CCNB2O95067 398 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 HOXB4P17483 251 aaPredicted RBP11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 COX5AP20674 150 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 FUT4P22083 530 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 CSNK1A1P48729 337 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 ARHGDIAP52565 204 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 SH3BGRP55822 239 aaPredicted RBP11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 CLRN1P58418 232 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 ROR2Q01974 943 aaKnown RBP11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 PPA1Q15181 289 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 SEC23BQ15437 767 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 TIMM23BQ5SRD1 257 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 C1QTNF12Q5T7M4 302 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 NHLRC1Q6VVB1 395 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 C20orf196Q8IYI0 205 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 C10orf67Q8IYJ2 551 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 ADGRG5Q8IZF4 528 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 C1orf162Q8NEQ5 155 aaPredicted RBP11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 MUS81Q96NY9 551 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 TXNIPQ9H3M7 391 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 CRLF2Q9HC73 371 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 GRHPRQ9UBQ7 328 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 EDARQ9UNE0 448 aa11.89□□□□□ -0.51
DNMT3A-214ENST00000491288 SAMHD1Q9Y3Z3 626 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms