RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 NPIPB7O75200 414 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 PTP4A3O75365 173 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 WBP4O75554 376 aaKnown RBP6.76□□□□□ -1.33
CLDN1-202ENST00000490800 OR7A10O76100 309 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 SNX4O95219 450 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 CH25HO95992 272 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 IGF2P01344 180 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 HPNP05981 417 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 GABRB1P18505 474 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 CCNA2P20248 432 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 CXCR1P25024 350 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 ELK4P28324 431 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 HTR3AP46098 478 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 MASP1P48740 699 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 FXYD6P3P58550 94 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 CDK5Q00535 292 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 FOXF1Q12946 379 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 MYBPHQ13203 477 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 FHL1Q13642 323 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 GINS1Q14691 196 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 MAD2L1BPQ15013 274 aaPredicted RBP6.76□□□□□ -1.33
CLDN1-202ENST00000490800 TOMM20Q15388 145 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 TESK1Q15569 626 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 PLPPR5Q32ZL2 321 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 SLC25A53Q5H9E4 307 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 C6orf141Q5SZD1 244 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 RIPPLY2Q5TAB7 128 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 TIGD3Q6B0B8 471 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 VASNQ6EMK4 673 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 ACSM5Q6NUN0 579 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 PLCZ1Q86YW0 608 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 ENTHD1Q8IYW4 607 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 CDK20Q8IZL9 346 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 ZNF786Q8N393 782 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 OR4K17Q8NGC6 315 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 OR4Q3Q8NH05 313 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 RHOXF1Q8NHV9 184 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 CNIH3Q8TBE1 160 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 FAM81AQ8TBF8 368 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 TEX47Q8TBZ9 253 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 POC1BQ8TC44 478 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 FANK1Q8TC84 345 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 APH1BQ8WW43 257 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 TMEM234Q8WY98 164 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 HDAC2Q92769 488 aaKnown RBP6.76□□□□□ -1.33
CLDN1-202ENST00000490800 OSTF1Q92882 214 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 C1GALT1C1Q96EU7 318 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 TMEM41AQ96HV5 264 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 SAMD8Q96LT4 415 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 TSSK6Q9BXA6 273 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 YTHDF1Q9BYJ9 559 aaKnown RBP6.76□□□□□ -1.33
CLDN1-202ENST00000490800 UBQLN3Q9H347 655 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 IL20Q9NYY1 176 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 KCNN3Q9UGI6 736 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 SIGLEC7Q9Y286 467 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 MYRFQ9Y2G1 1151 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 SLC6A5Q9Y345 797 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 TMED7Q9Y3B3 224 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 MED12Q93074 2177 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 DNAJC13O75165 2243 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 CACNA1CQ13936 2221 aa6.76□□□□□ -1.33
CLDN1-202ENST00000490800 TRAV27A0A087WT01 109 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 ZC3H12DA2A288 527 aaKnown RBP6.75□□□□□ -1.33
CLDN1-202ENST00000490800 HTR3EA5X5Y0 456 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 TRIM64A6NGJ6 449 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 HSPB2A8KAH6 182 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 FAM47E-STBD1D6RA91 191 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 LRRN3E7EW58 273 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 EFNA2O43921 213 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 RCBTB2O95199 551 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 TNFAIP8O95379 198 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 BGLAPP02818 100 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 SMIM18P0DKX4 95 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 SAGP10523 405 aaPredicted RBP6.75□□□□□ -1.33
CLDN1-202ENST00000490800 BMP7P18075 431 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 BMP5P22003 454 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 FMO3P31513 532 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 UQCRC1P31930 480 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 CEACAM8P31997 349 aaPredicted RBP6.75□□□□□ -1.33
CLDN1-202ENST00000490800 APOBEC1P41238 236 aaKnown RBP6.75□□□□□ -1.33
CLDN1-202ENST00000490800 SLC9A3P48764 834 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 ZNF41P51814 821 aaPredicted RBP6.75□□□□□ -1.33
CLDN1-202ENST00000490800 CDC42P60953 191 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 LTBQ06643 244 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 HSPB2Q16082 182 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 ZNF74Q16587 644 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 NKPD1Q17RQ9 610 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 PGGHGQ32M88 737 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 SLC25A35Q3KQZ1 300 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 ZBED5Q49AG3 693 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 KCTD21Q4G0X4 260 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 CLEC12AQ5QGZ9 265 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 POMZP3Q6PJE2 187 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 YRDCQ86U90 279 aaKnown RBP6.75□□□□□ -1.33
CLDN1-202ENST00000490800 TMEM200AQ86VY9 491 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 CCDC103Q8IW40 242 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 LRRC17Q8N6Y2 441 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 NAXEQ8NCW5 288 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 OR1J4Q8NGS1 313 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 OR51A7Q8NH64 312 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms