RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 MICAQ29983 383 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 ZNF770Q6IQ21 691 aaPredicted RBP23.59■■□□□ 1.37
CCM2-211ENST00000478582 PGBD2Q6P3X8 592 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 TMEM200AQ86VY9 491 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 ZNF433Q8N7K0 673 aaPredicted RBP23.59■■□□□ 1.37
CCM2-211ENST00000478582 GNPDA2Q8TDQ7 276 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 KISS1RQ969F8 398 aaPredicted RBP23.59■■□□□ 1.37
CCM2-211ENST00000478582 DACH2Q96NX9 599 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 TAS2R16Q9NYV7 291 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 DNAJB9Q9UBS3 223 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 UNC119BA6NIH7 251 aa23.58■■□□□ 1.37
CCM2-211ENST00000478582 RPL36A-HNRNPH2H7BZ11 118 aa23.58■■□□□ 1.37
CCM2-211ENST00000478582 UPK3AO75631 287 aa23.58■■□□□ 1.37
CCM2-211ENST00000478582 BCL10O95999 233 aa23.58■■□□□ 1.37
CCM2-211ENST00000478582 GSSP48637 474 aa23.58■■□□□ 1.37
CCM2-211ENST00000478582 ACTR3P61158 418 aa23.58■■□□□ 1.37
CCM2-211ENST00000478582 PPP1R8Q12972 351 aaKnown RBP23.58■■□□□ 1.37
CCM2-211ENST00000478582 WDFY1Q8IWB7 410 aa23.58■■□□□ 1.37
CCM2-211ENST00000478582 C20orf196Q8IYI0 205 aa23.58■■□□□ 1.37
CCM2-211ENST00000478582 LINC01560Q8TB33 94 aa23.58■■□□□ 1.37
CCM2-211ENST00000478582 WFIKKN1Q96NZ8 548 aa23.58■■□□□ 1.37
CCM2-211ENST00000478582 RAB3IPQ96QF0 476 aaPredicted RBP23.58■■□□□ 1.37
CCM2-211ENST00000478582 TXNIPQ9H3M7 391 aa23.58■■□□□ 1.37
CCM2-211ENST00000478582 U3KQV3 271 aa23.58■■□□□ 1.37
CCM2-211ENST00000478582 CSMD1Q96PZ7 3565 aa23.58■■□□□ 1.36
CCM2-211ENST00000478582 GNGT2O14610 69 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 CTAG2O75638 210 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 IGHMP01871 453 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 ITGA5P08648 1049 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 EPXP11678 715 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 ZNF26P17031 533 aaPredicted RBP23.57■■□□□ 1.36
CCM2-211ENST00000478582 MPGP29372 298 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 DAP3P51398 398 aaKnown RBP23.57■■□□□ 1.36
CCM2-211ENST00000478582 LGALS3BPQ08380 585 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 TSPAN31Q12999 210 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 ACKR1Q16570 336 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 BHLHA15Q7RTS1 189 aaPredicted RBP23.57■■□□□ 1.36
CCM2-211ENST00000478582 HDDC2Q7Z4H3 204 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 SLC25A44Q96H78 314 aaPredicted RBP23.57■■□□□ 1.36
CCM2-211ENST00000478582 BOD1Q96IK1 185 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 ACTR6Q9GZN1 396 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 AP4S1Q9Y587 144 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 TACC2O95359 2948 aa23.57■■□□□ 1.36
CCM2-211ENST00000478582 ANKHD1Q8IWZ3 2542 aaKnown RBP23.56■■□□□ 1.36
CCM2-211ENST00000478582 FAM221AA4D161 298 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 SH3D21A4FU49 640 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 CENPBD1B2RD01 187 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 ZNF587BE7ETH6 402 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 LYZL6O75951 148 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 KRT33AO76009 404 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 IL32P24001 234 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 DNAJA1P31689 397 aaKnown RBP23.56■■□□□ 1.36
CCM2-211ENST00000478582 FOXG1P55316 489 aaPredicted RBP23.56■■□□□ 1.36
CCM2-211ENST00000478582 CTXN1P60606 82 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 CAMK2DQ13557 499 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 TSC22D1Q15714 1073 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 ARMC4Q5T2S8 1044 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 LINGO2Q7L985 606 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 GPR137CQ8N3F9 429 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 OR9Q2Q8NGE9 314 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 ASB10Q8WXI3 467 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 NDEL1Q9GZM8 345 aa23.56■■□□□ 1.36
CCM2-211ENST00000478582 STX18Q9P2W9 335 aaKnown RBP23.56■■□□□ 1.36
CCM2-211ENST00000478582 ARRDC5A6NEK1 342 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 TIPRLO75663 272 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 NDUFB2O95178 105 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 FXYD6P3P58550 94 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 MELKQ14680 651 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 DAZAP2Q15038 168 aaPredicted RBP23.55■■□□□ 1.36
CCM2-211ENST00000478582 CARD17Q5XLA6 110 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 ANKRD34AQ69YU3 496 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 OR7E24Q6IFN5 339 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 C22orf34Q6ZV56 151 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 CDH24Q86UP0 819 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 C1orf162Q8NEQ5 155 aaPredicted RBP23.55■■□□□ 1.36
CCM2-211ENST00000478582 TMEM54Q969K7 222 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 S100PBPQ96BU1 408 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 MUS81Q96NY9 551 aa23.55■■□□□ 1.36
CCM2-211ENST00000478582 GPX7Q96SL4 187 aaPredicted RBP23.55■■□□□ 1.36
CCM2-211ENST00000478582 CSMD2Q7Z408 3487 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 POLQO75417 2590 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 MCIDASD6RGH6 385 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 DEAF1O75398 565 aaPredicted RBP23.54■■□□□ 1.36
CCM2-211ENST00000478582 GASTP01350 101 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 CD14P08571 375 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 PGA4P0DJD7 388 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 PGA3P0DJD8 388 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 RPL27P61353 136 aaKnown RBP23.54■■□□□ 1.36
CCM2-211ENST00000478582 TGFBR3Q03167 851 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 KPNB1Q14974 876 aaKnown RBP23.54■■□□□ 1.36
CCM2-211ENST00000478582 GABRA6Q16445 453 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 ZSCAN26Q16670 478 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 PHYHD1Q5SRE7 291 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 P2RY8Q86VZ1 359 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 ZNF566Q969W8 418 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 ALKBH3Q96Q83 286 aaPredicted RBP23.54■■□□□ 1.36
CCM2-211ENST00000478582 MED18Q9BUE0 208 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 DGCR6LQ9BY27 220 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 MRPL13Q9BYD1 178 aaKnown RBP23.54■■□□□ 1.36
CCM2-211ENST00000478582 NTN4Q9HB63 628 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms