RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 C10orf53Q8N6V4 93 aa0.42□□□□□ -2.34
NCKAP1-204ENST00000477988 OR9A2Q8NGT5 310 aa0.42□□□□□ -2.34
NCKAP1-204ENST00000477988 DQX1Q8TE96 717 aaKnown RBP0.42□□□□□ -2.34
NCKAP1-204ENST00000477988 SDR42E1Q8WUS8 393 aa0.42□□□□□ -2.34
NCKAP1-204ENST00000477988 SHC3Q92529 594 aa0.42□□□□□ -2.34
NCKAP1-204ENST00000477988 SYNDIG1Q9H7V2 258 aa0.42□□□□□ -2.34
NCKAP1-204ENST00000477988 POPDC2Q9HBU9 364 aa0.42□□□□□ -2.34
NCKAP1-204ENST00000477988 CYP39A1Q9NYL5 469 aa0.42□□□□□ -2.34
NCKAP1-204ENST00000477988 SIGLEC8Q9NYZ4 499 aa0.42□□□□□ -2.34
NCKAP1-204ENST00000477988 AIPL1Q9NZN9 384 aa0.42□□□□□ -2.34
NCKAP1-204ENST00000477988 PSG8Q9UQ74 426 aa0.42□□□□□ -2.34
NCKAP1-204ENST00000477988 RPAP1Q9BWH6 1393 aaPredicted RBP0.42□□□□□ -2.34
NCKAP1-204ENST00000477988 TMEM120BA0PK00 339 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 SYCE3A1L190 88 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 SDHAF1A6NFY7 115 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 LOC110117498-PIK3R3F6TDL0 507 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 RASGRF2O14827 1237 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 LRATO95237 230 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 HLA-DQA1P01909 254 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 GAPDHP04406 335 aaKnown RBP0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 ZNF735P0CB33 412 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 CDKN2BP42772 138 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 FUT5Q11128 374 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 CCDC40Q4G0X9 1142 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 TPGS2Q68CL5 300 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 CASP12Q6UXS9 341 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 USP50Q70EL3 339 aaPredicted RBP0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 PGAP1Q75T13 922 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 ZSCAN30Q86W11 494 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 CBWD2Q8IUF1 395 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 CCDC65Q8IXS2 484 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 MINDY2Q8NBR6 621 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 FBXL13Q8NEE6 735 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 FAM110BQ8TC76 370 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 HGDQ93099 445 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 MYLPFQ96A32 169 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 PINX1Q96BK5 328 aaKnown RBP0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 SGK3Q96BR1 496 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 FLYWCH2Q96CP2 140 aaKnown RBP0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 ZNF317Q96PQ6 595 aaPredicted RBP0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 NEK6Q9HC98 313 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 MCCC2Q9HCC0 563 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 THUMPD1Q9NXG2 353 aaKnown RBP0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 TMOD2Q9NZR1 351 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 KIAA1257Q9ULG3 409 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 NPIPA1Q9UND3 350 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 COPS3Q9UNS2 423 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 AK6Q9Y3D8 172 aaKnown RBP0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 ZNF337Q9Y3M9 751 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 RPL36Q9Y3U8 105 aaKnown RBP0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 CUX2O14529 1486 aa0.41□□□□□ -2.34
NCKAP1-204ENST00000477988 ADAMTS13Q76LX8 1427 aa0.4□□□□□ -2.34
NCKAP1-204ENST00000477988 IGKV1D-13A0A0B4J2D9 117 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 CFAP73A6NFT4 308 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 TIMM44O43615 452 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 KINO60870 393 aaKnown RBP0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 GCM2O75603 506 aaPredicted RBP0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 H6PDO95479 791 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 MBD3O95983 291 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 HLA-DPB1P04440 258 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 UBTFL6P0CB48 400 aaPredicted RBP0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 IGKV1-13P0DP09 117 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 HRES1P13985 223 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 PGCP20142 388 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 COX5AP20674 150 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 KIF5BP33176 963 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 NAPAP54920 295 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 ARG2P78540 354 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 NUCB2P80303 420 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 RPA4Q13156 261 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 PON3Q15166 354 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 RGNQ15493 299 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 BEND3Q5T5X7 828 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 AP1ARQ63HQ0 302 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 OR2A2Q6IF42 318 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 KCNIP4Q6PIL6 250 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 CENPUQ71F23 418 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 ACOT1Q86TX2 421 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 NT5DC3Q86UY8 548 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 IPMKQ8NFU5 416 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 LILRB4Q8NHJ6 448 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 KRT35Q92764 455 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 NSMCE2Q96MF7 247 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 VPS35Q96QK1 796 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 RAB17Q9H0T7 212 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 LY9Q9HBG7 655 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 SYTL2Q9HCH5 934 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 SLC17A5Q9NRA2 495 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 IKBKGQ9Y6K9 419 aa0.4□□□□□ -2.35
NCKAP1-204ENST00000477988 A0A1B0GVI7 797 aa0.39□□□□□ -2.35
NCKAP1-204ENST00000477988 C5orf63A6NC05 138 aa0.39□□□□□ -2.35
NCKAP1-204ENST00000477988 BTNL10A8MVZ5 291 aa0.39□□□□□ -2.35
NCKAP1-204ENST00000477988 E7EQL1 145 aa0.39□□□□□ -2.35
NCKAP1-204ENST00000477988 PFKFB2O60825 505 aa0.39□□□□□ -2.35
NCKAP1-204ENST00000477988 TOM1L1O75674 476 aa0.39□□□□□ -2.35
NCKAP1-204ENST00000477988 RP2O75695 350 aa0.39□□□□□ -2.35
NCKAP1-204ENST00000477988 CNMDO75829 334 aa0.39□□□□□ -2.35
NCKAP1-204ENST00000477988 UQCRFS1P1P0C7P4 283 aa0.39□□□□□ -2.35
NCKAP1-204ENST00000477988 TPSB2P20231 275 aa0.39□□□□□ -2.35
NCKAP1-204ENST00000477988 AHCYP23526 432 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms