RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TMEM41BQ5BJD5 291 aa17.18■□□□□ 0.34
VARS2-209ENST00000477288 MARCH3Q86UD3 253 aa17.18■□□□□ 0.34
VARS2-209ENST00000477288 CHTF18Q8WVB6 975 aa17.18■□□□□ 0.34
VARS2-209ENST00000477288 ADAM19Q9H013 955 aa17.18■□□□□ 0.34
VARS2-209ENST00000477288 MYH6P13533 1939 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 A0A1W2PPH5 198 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 PHF1O43189 567 aaPredicted RBP17.17■□□□□ 0.34
VARS2-209ENST00000477288 ZNF728P0DKX0 622 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 GNB1P62873 340 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 HBG1P69891 147 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 HBG2P69892 147 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 SELPLGQ14242 412 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 FRMPD2BQ6IN97 320 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 TLCD2A6NGC4 264 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 TMEM212A6NML5 194 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 IMPA1P29218 277 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 TBPL2Q6SJ96 375 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 PIGTQ969N2 578 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 ATOH8Q96SQ7 321 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 FN3KRPQ9HA64 309 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 IL37Q9NZH6 218 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 C20orf202A1L168 122 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 FOLR1P15328 257 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 ACSM1Q08AH1 577 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 TATDN3Q17R31 274 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 C5orf46Q6UWT4 87 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 SLC35G3Q8N808 338 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 OR8U8P0C7N1 319 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 MMP12P39900 470 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 RACK1P63244 317 aaKnown RBP17.17■□□□□ 0.34
VARS2-209ENST00000477288 TSPAN31Q12999 210 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 ZNF468Q5VIY5 522 aaPredicted RBP17.17■□□□□ 0.34
VARS2-209ENST00000477288 ADAMTSL4Q6UY14 1074 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 LACC1Q8IV20 430 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 OR5M1Q8NGP8 315 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 SHARPINQ9H0F6 387 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 ADRA1AP35348 466 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 RPS25P62851 125 aaKnown RBP17.17■□□□□ 0.34
VARS2-209ENST00000477288 SMN1Q16637 294 aaKnown RBP17.17■□□□□ 0.34
VARS2-209ENST00000477288 CREB3L2Q70SY1 520 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 RNF113BQ8IZP6 322 aaKnown RBP17.17■□□□□ 0.34
VARS2-209ENST00000477288 ZBP1Q9H171 429 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 HS3ST2Q9Y278 367 aa17.17■□□□□ 0.34
VARS2-209ENST00000477288 MYH1P12882 1939 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 CBR1P16152 277 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 BAGE3Q86Y29 109 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 BAGE2Q86Y30 109 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 BOD1Q96IK1 185 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 NMNAT3Q96T66 252 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 ALOX12BO75342 701 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 AGFG1P52594 562 aaKnown RBP17.16■□□□□ 0.34
VARS2-209ENST00000477288 OR1E3Q8WZA6 343 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 TINAGL1Q9GZM7 467 aaPredicted RBP17.16■□□□□ 0.34
VARS2-209ENST00000477288 IGHV3-20A0A0C4DH32 117 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 SEMA3BQ13214 749 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 RBMS2Q15434 407 aaKnown RBP17.16■□□□□ 0.34
VARS2-209ENST00000477288 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.16■□□□□ 0.34
VARS2-209ENST00000477288 SLC46A1Q96NT5 459 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 MTCH1Q9NZJ7 389 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 SGCEO43556 437 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 EIF1BO60739 113 aaKnown RBP17.16■□□□□ 0.34
VARS2-209ENST00000477288 PAX6P26367 422 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 REEP5Q00765 189 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 C6orf15Q6UXA7 325 aaPredicted RBP17.16■□□□□ 0.34
VARS2-209ENST00000477288 SUMF1Q8NBK3 374 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 LGALS14Q8TCE9 139 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 ARV1Q9H2C2 271 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 IGHV3-9P01782 118 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 ZNF91Q05481 1191 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 SPCS2Q15005 226 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 SKA3Q8IX90 412 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 NANPQ8TBE9 248 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 FAM212BQ9NTI7 297 aaPredicted RBP17.16■□□□□ 0.34
VARS2-209ENST00000477288 SAGE1Q9NXZ1 904 aa17.16■□□□□ 0.34
VARS2-209ENST00000477288 SHISA7A6NL88 538 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 CPEB2Q7Z5Q1 589 aaKnown RBP17.15■□□□□ 0.34
VARS2-209ENST00000477288 DRAXINQ8NBI3 349 aaPredicted RBP17.15■□□□□ 0.34
VARS2-209ENST00000477288 ARPC5LQ9BPX5 153 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 HEYLQ9NQ87 328 aaPredicted RBP17.15■□□□□ 0.34
VARS2-209ENST00000477288 TAS2R16Q9NYV7 291 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 B3GAT1Q9P2W7 334 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 MOKQ9UQ07 419 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 PRELID3BQ9Y3B1 194 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 AADACP22760 399 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 CD27P26842 260 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 WDR5BQ86VZ2 330 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 PDLIM5Q96HC4 596 aaKnown RBP17.15■□□□□ 0.34
VARS2-209ENST00000477288 THAP10Q9P2Z0 257 aaPredicted RBP17.15■□□□□ 0.34
VARS2-209ENST00000477288 LINC01553A4QN01 128 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 SVBPQ8N300 66 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 SLC30A7Q8NEW0 376 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 GOT1L1Q8NHS2 421 aaPredicted RBP17.15■□□□□ 0.34
VARS2-209ENST00000477288 OR2M2Q96R28 347 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 PURGQ9UJV8 347 aaKnown RBP17.15■□□□□ 0.34
VARS2-209ENST00000477288 PRAMEF25A6NGN4 478 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 NDUFB7P17568 137 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 GABREP78334 506 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 EXT1Q16394 746 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 PARM1Q6UWI2 310 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 GCNT2Q8N0V5 402 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms