RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 FADS6Q8N9I5 356 aa19.63■□□□□ 0.73
CCM2-206ENST00000474617 OR10G3Q8NGC4 313 aa19.63■□□□□ 0.73
CCM2-206ENST00000474617 ZNF417Q8TAU3 575 aa19.63■□□□□ 0.73
CCM2-206ENST00000474617 ADAD1Q96M93 576 aaKnown RBP19.63■□□□□ 0.73
CCM2-206ENST00000474617 DCLRE1CQ96SD1 692 aaKnown RBP19.63■□□□□ 0.73
CCM2-206ENST00000474617 ZNF587Q96SQ5 575 aaPredicted RBP19.63■□□□□ 0.73
CCM2-206ENST00000474617 MRI1Q9BV20 369 aa19.63■□□□□ 0.73
CCM2-206ENST00000474617 CHST11Q9NPF2 352 aa19.63■□□□□ 0.73
CCM2-206ENST00000474617 MED11Q9P086 117 aa19.63■□□□□ 0.73
CCM2-206ENST00000474617 PISDQ9UG56 409 aa19.63■□□□□ 0.73
CCM2-206ENST00000474617 PADI1Q9ULC6 663 aa19.63■□□□□ 0.73
CCM2-206ENST00000474617 COPS3Q9UNS2 423 aa19.63■□□□□ 0.73
CCM2-206ENST00000474617 ZNF281Q9Y2X9 895 aa19.63■□□□□ 0.73
CCM2-206ENST00000474617 HS3ST3B1Q9Y662 390 aa19.63■□□□□ 0.73
CCM2-206ENST00000474617 LAMA1P25391 3075 aa19.62■□□□□ 0.73
CCM2-206ENST00000474617 NSG1A0A0A6YYJ2 146 aa19.62■□□□□ 0.73
CCM2-206ENST00000474617 PDCD5O14737 125 aa19.62■□□□□ 0.73
CCM2-206ENST00000474617 AHCYP23526 432 aa19.62■□□□□ 0.73
CCM2-206ENST00000474617 C1QL3Q5VWW1 255 aa19.62■□□□□ 0.73
CCM2-206ENST00000474617 LRRC28Q86X40 367 aaPredicted RBP19.62■□□□□ 0.73
CCM2-206ENST00000474617 LIN37Q96GY3 246 aaPredicted RBP19.62■□□□□ 0.73
CCM2-206ENST00000474617 CMTM3Q96MX0 182 aa19.62■□□□□ 0.73
CCM2-206ENST00000474617 TAAR9Q96RI9 348 aa19.62■□□□□ 0.73
CCM2-206ENST00000474617 SDHCQ99643 169 aaPredicted RBP19.62■□□□□ 0.73
CCM2-206ENST00000474617 RNF32Q9H0A6 362 aa19.62■□□□□ 0.73
CCM2-206ENST00000474617 SYT4Q9H2B2 425 aa19.62■□□□□ 0.73
CCM2-206ENST00000474617 GALNT9Q9HCQ5 603 aa19.62■□□□□ 0.73
CCM2-206ENST00000474617 SRA1Q9HD15 236 aaKnown RBP19.62■□□□□ 0.73
CCM2-206ENST00000474617 B9D1Q9UPM9 204 aa19.62■□□□□ 0.73
CCM2-206ENST00000474617 LOXL2Q9Y4K0 774 aa19.62■□□□□ 0.73
CCM2-206ENST00000474617 ITGA10O75578 1167 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 ALOX5APP20292 161 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 EVX1P49640 407 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 SSR4P51571 173 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 FOXF1Q12946 379 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 EIF3IQ13347 325 aaKnown RBP19.61■□□□□ 0.73
CCM2-206ENST00000474617 OR8H2Q8N162 312 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 OR2M3Q8NG83 312 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 OR4K17Q8NGC6 315 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 ZNRF4Q8WWF5 429 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 SOSTQ9BQB4 213 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 ZCCHC4Q9H5U6 513 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 ACOXLQ9NUZ1 547 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 ABRACLQ9P1F3 81 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 LIPT2A6NK58 231 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 NPIPA5E9PKD4 350 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 C11orf98E9PRG8 122 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 LRRTM2O43300 516 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 TMCC2O75069 709 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 RAB3BP20337 219 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 TALDO1P37837 337 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 GLO1Q04760 184 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 RASGEF1BQ0VAM2 473 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 SELENBP1Q13228 472 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 ZNF79Q15937 498 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 SFXN4Q6P4A7 337 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 FDX2Q6P4F2 183 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 C6orf15Q6UXA7 325 aaPredicted RBP19.61■□□□□ 0.73
CCM2-206ENST00000474617 ZNF511Q8NB15 262 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 OTOSQ8NHW6 89 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 NECAB3Q96P71 396 aaPredicted RBP19.61■□□□□ 0.73
CCM2-206ENST00000474617 CDC6Q99741 560 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 COMMD3Q9UBI1 195 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 TEKT2Q9UIF3 430 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 NPIPA1Q9UND3 350 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 HDGFL3Q9Y3E1 203 aa19.61■□□□□ 0.73
CCM2-206ENST00000474617 CHCHD2Q9Y6H1 151 aaPredicted RBP19.61■□□□□ 0.73
CCM2-206ENST00000474617 LNP1A1A4G5 178 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 SLC22A23A1A5C7 686 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 NOTOA8MTQ0 251 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 STK17BO94768 372 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 AVPR2P30518 371 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 TLE3Q04726 772 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 ZNF239Q16600 458 aaKnown RBP19.6■□□□□ 0.73
CCM2-206ENST00000474617 SLC18B1Q6NT16 456 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 FAM199XQ6PEV8 388 aaPredicted RBP19.6■□□□□ 0.73
CCM2-206ENST00000474617 KCTD18Q6PI47 426 aaPredicted RBP19.6■□□□□ 0.73
CCM2-206ENST00000474617 SNX29P2Q8IUI4 249 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 PM20D2Q8IYS1 436 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 RFLNBQ8N5W9 214 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 FAM83FQ8NEG4 500 aaPredicted RBP19.6■□□□□ 0.73
CCM2-206ENST00000474617 OR11G2Q8NGC1 345 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 SGCZQ96LD1 299 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 MESP1Q9BRJ9 268 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 OR11A1Q9GZK7 315 aa19.6■□□□□ 0.73
CCM2-206ENST00000474617 AKIRIN1Q9H9L7 192 aaPredicted RBP19.6■□□□□ 0.73
CCM2-206ENST00000474617 RPH3AQ9Y2J0 694 aaPredicted RBP19.6■□□□□ 0.73
CCM2-206ENST00000474617 SHISA3A0PJX4 238 aa19.59■□□□□ 0.73
CCM2-206ENST00000474617 TMEM212A6NML5 194 aa19.59■□□□□ 0.73
CCM2-206ENST00000474617 C17orf51A8MQB3 221 aa19.59■□□□□ 0.73
CCM2-206ENST00000474617 AGRPO00253 132 aa19.59■□□□□ 0.73
CCM2-206ENST00000474617 RAF1P04049 648 aa19.59■□□□□ 0.73
CCM2-206ENST00000474617 IL7P13232 177 aa19.59■□□□□ 0.73
CCM2-206ENST00000474617 APEX1P27695 318 aaKnown RBP19.59■□□□□ 0.73
CCM2-206ENST00000474617 SHC1P29353 583 aa19.59■□□□□ 0.73
CCM2-206ENST00000474617 HCCSP53701 268 aa19.59■□□□□ 0.73
CCM2-206ENST00000474617 ASAH1Q13510 395 aa19.59■□□□□ 0.73
CCM2-206ENST00000474617 DNASE1L3Q13609 305 aa19.59■□□□□ 0.73
CCM2-206ENST00000474617 LPAL2Q16609 132 aa19.59■□□□□ 0.73
CCM2-206ENST00000474617 HSD17B12Q53GQ0 312 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms