RNA–Protein interactions for RNA: ENST00000473517.1

SATB2-208, Transcript of SATB homeobox 2, humanhuman

TSL 3

Gene SATB2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-208ENST00000473517 CPNE1Q99829 537 aa6.73□□□□□ -1.33
SATB2-208ENST00000473517 CHID1Q9BWS9 393 aa6.73□□□□□ -1.33
SATB2-208ENST00000473517 RANBP3Q9H6Z4 567 aaPredicted RBP6.73□□□□□ -1.33
SATB2-208ENST00000473517 ZNF224Q9NZL3 707 aa6.73□□□□□ -1.33
SATB2-208ENST00000473517 CPSF2Q9P2I0 782 aaKnown RBP6.73□□□□□ -1.33
SATB2-208ENST00000473517 PCTPQ9UKL6 214 aa6.73□□□□□ -1.33
SATB2-208ENST00000473517 ZDHHC8Q9ULC8 765 aa6.73□□□□□ -1.33
SATB2-208ENST00000473517 RASD1Q9Y272 281 aa6.73□□□□□ -1.33
SATB2-208ENST00000473517 TMED7Q9Y3B3 224 aa6.73□□□□□ -1.33
SATB2-208ENST00000473517 LSM4Q9Y4Z0 139 aaKnown RBP6.73□□□□□ -1.33
SATB2-208ENST00000473517 ALMS1Q8TCU4 4167 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 ZC3H12DA2A288 527 aaKnown RBP6.72□□□□□ -1.33
SATB2-208ENST00000473517 ZSCAN5BA6NJL1 495 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 ZNF879B4DU55 563 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 STX16-NPEPL1H3BU86 382 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 MANBAO00462 879 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 DNALI1O14645 258 aaPredicted RBP6.72□□□□□ -1.33
SATB2-208ENST00000473517 STX16O14662 325 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 PDPK1O15530 556 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 ENSAO43768 121 aaKnown RBP6.72□□□□□ -1.33
SATB2-208ENST00000473517 PIAS1O75925 651 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 TOX4O94842 621 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 UBL3O95164 117 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 HMGN2P05204 90 aaKnown RBP6.72□□□□□ -1.33
SATB2-208ENST00000473517 CHRM4P08173 479 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 FBP1P09467 338 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 RYKP34925 604 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 POLR2HP52434 150 aaKnown RBP6.72□□□□□ -1.33
SATB2-208ENST00000473517 UCP2P55851 309 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 CLDN17P56750 224 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 COX10Q12887 443 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 PMS2P3Q13401 168 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 LASP1Q14847 261 aaKnown RBP6.72□□□□□ -1.33
SATB2-208ENST00000473517 SPRNQ5BIV9 151 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 AP1ARQ63HQ0 302 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 SLC27A4Q6P1M0 643 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 CCDC137Q6PK04 289 aaKnown RBP6.72□□□□□ -1.33
SATB2-208ENST00000473517 ZNF813Q6ZN06 617 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 LIAT1Q6ZQX7 453 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 PIWIL3Q7Z3Z3 882 aaKnown RBP6.72□□□□□ -1.33
SATB2-208ENST00000473517 CMC1Q7Z7K0 106 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 COMTD1Q86VU5 262 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 ZNF584Q8IVC4 421 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 PIK3C3Q8NEB9 887 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 FAM71CQ8NEG0 241 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 PPP1R35Q8TAP8 253 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 GATAD1Q8WUU5 269 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 NEIL1Q96FI4 390 aaPredicted RBP6.72□□□□□ -1.33
SATB2-208ENST00000473517 SAMD8Q96LT4 415 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 ACPTQ9BZG2 426 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 SLC19A3Q9BZV2 496 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 ZNRD1Q9P1U0 126 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 SLC17A7Q9P2U7 560 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 CGGBP1Q9UFW8 167 aaPredicted RBP6.72□□□□□ -1.33
SATB2-208ENST00000473517 OSGIN1Q9UJX0 560 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 CAB39Q9Y376 341 aaPredicted RBP6.72□□□□□ -1.33
SATB2-208ENST00000473517 DNAH10Q8IVF4 4471 aa6.72□□□□□ -1.33
SATB2-208ENST00000473517 PPP6CO00743 305 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 MFN2O95140 757 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 SNAP29O95721 258 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 PF4P02776 101 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 TNFRSF1AP19438 455 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 SLC6A2P23975 617 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 CHATP28329 748 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 PGM1P36871 562 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 FNTAP49354 379 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 TNFAIP6P98066 277 aaPredicted RBP6.71□□□□□ -1.34
SATB2-208ENST00000473517 HNRNPA0Q13151 305 aaKnown RBP6.71□□□□□ -1.34
SATB2-208ENST00000473517 ZMAT1Q5H9K5 638 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 EMBQ6PCB8 327 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 NLRC3Q7RTR2 1065 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 CCDC91Q7Z6B0 441 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 CALHM3Q86XJ0 350 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 CENPLQ8N0S6 344 aaPredicted RBP6.71□□□□□ -1.34
SATB2-208ENST00000473517 PAQR4Q8N4S7 273 aaPredicted RBP6.71□□□□□ -1.34
SATB2-208ENST00000473517 SLC30A7Q8NEW0 376 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 OR8B3Q8NGG8 313 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 NPRL2Q8WTW4 380 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 C10orf82Q8WW14 230 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 CDKL2Q92772 493 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 PHF21BQ96EK2 531 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 FAM120BQ96EK7 910 aaKnown RBP6.71□□□□□ -1.34
SATB2-208ENST00000473517 ZNF764Q96H86 408 aaPredicted RBP6.71□□□□□ -1.34
SATB2-208ENST00000473517 CLPTM1LQ96KA5 538 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 WDFY2Q96P53 400 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 GPR78Q96P69 363 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 OR8B2Q96RD0 313 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 CITED4Q96RK1 184 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 SDF2Q99470 211 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 TAPBPLQ9BX59 468 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 OR51B6Q9H340 312 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 CDH20Q9HBT6 801 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 TCF7L2Q9NQB0 619 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 EXD2Q9NVH0 621 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 NOP53Q9NZM5 478 aaKnown RBP6.71□□□□□ -1.34
SATB2-208ENST00000473517 CLN8Q9UBY8 286 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 KCNE5Q9UJ90 142 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 ZNF225Q9UK10 706 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 TMCO1Q9UM00 188 aa6.71□□□□□ -1.34
SATB2-208ENST00000473517 SLC35A3Q9Y2D2 325 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms