RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CTPS2Q9NRF8 586 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 NECAP2Q9NVZ3 263 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 PIKFYVEQ9Y2I7 2098 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 MSH6P52701 1360 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 IGKV2-28A0A075B6P5 120 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 PRSS37A4D1T9 235 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 ERVV-1B6SEH8 477 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 ANGPTL7O43827 346 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 IGKV2D-28P01615 120 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 GAPDHP04406 335 aaKnown RBP3.29□□□□□ -1.88
CLK1-209ENST00000472679 RETP07949 1114 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 UBTFL1P0CB47 393 aaPredicted RBP3.29□□□□□ -1.88
CLK1-209ENST00000472679 TCN1P20061 433 aaPredicted RBP3.29□□□□□ -1.88
CLK1-209ENST00000472679 SLC2A5P22732 501 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 CD1CP29017 333 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 FDFT1P37268 417 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 MNAT1P51948 309 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 OGDHQ02218 1023 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 AQP6Q13520 282 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 PCP2Q8IVA1 136 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 FAM83FQ8NEG4 500 aaPredicted RBP3.29□□□□□ -1.88
CLK1-209ENST00000472679 OR10G2Q8NGC3 310 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 ZFP90Q8TF47 636 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 OR8B4Q96RC9 309 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 AZI2Q9H6S1 392 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 NIPAL2Q9H841 368 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 EXD2Q9NVH0 621 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 PACSIN2Q9UNF0 486 aaPredicted RBP3.29□□□□□ -1.88
CLK1-209ENST00000472679 PIGLQ9Y2B2 252 aa3.29□□□□□ -1.88
CLK1-209ENST00000472679 NFASCO94856 1347 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 PPIAL4EA0A075B759 164 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 LRCOL1A6NCL2 159 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 H3BNH8 94 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 FOXE1O00358 373 aaPredicted RBP3.28□□□□□ -1.88
CLK1-209ENST00000472679 AIREO43918 545 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 SPAG7O75391 227 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 MED6O75586 246 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 UPK3AO75631 287 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 C1orf105O95561 183 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 TSPAN12O95859 305 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 IGHV2-5P01817 119 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 PPIAL4FP0DN26 164 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 GPR6P46095 362 aaPredicted RBP3.28□□□□□ -1.88
CLK1-209ENST00000472679 NCBP2P52298 156 aaKnown RBP eCLIP3.28□□□□□ -1.88
CLK1-209ENST00000472679 SEC61GP60059 68 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 HMGCS1Q01581 520 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 FAM83EQ2M2I3 478 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 ZBED5Q49AG3 693 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 PUSL1Q8N0Z8 303 aaKnown RBP3.28□□□□□ -1.88
CLK1-209ENST00000472679 CYB561D1Q8N8Q1 229 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 ZNF557Q8N988 423 aaPredicted RBP3.28□□□□□ -1.88
CLK1-209ENST00000472679 TRPV1Q8NER1 839 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 SLC22A8Q8TCC7 542 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 SGK3Q96BR1 496 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 MED8Q96G25 268 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 C12orf42Q96LP6 360 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 CNN2Q99439 309 aaKnown RBP3.28□□□□□ -1.88
CLK1-209ENST00000472679 SORT1Q99523 831 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 ECSITQ9BQ95 431 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 CRACR2AQ9BSW2 395 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 ANKRD19PQ9H560 264 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 NTN4Q9HB63 628 aa3.28□□□□□ -1.88
CLK1-209ENST00000472679 MRPL47Q9HD33 250 aaKnown RBP3.28□□□□□ -1.88
CLK1-209ENST00000472679 CEMIPQ8WUJ3 1361 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 A0A1B0GVI7 797 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 BGLAPP02818 100 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 FGF1P05230 155 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 TLX1NBP0CAT3 122 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 SUB1P53999 127 aaKnown RBP eCLIP3.27□□□□□ -1.89
CLK1-209ENST00000472679 ENPEPQ07075 957 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 MRPL28Q13084 256 aaKnown RBP3.27□□□□□ -1.89
CLK1-209ENST00000472679 C16orf72Q14CZ0 275 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 ZNF77Q15935 545 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 COA6Q5JTJ3 125 aaKnown RBP3.27□□□□□ -1.89
CLK1-209ENST00000472679 LRRC31Q6UY01 552 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 ZNF695Q8IW36 515 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 ZNF679Q8IYX0 411 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 OR8J1Q8NGP2 316 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 CD300LFQ8TDQ1 290 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 TCEANC2Q96MN5 208 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 FOPNLQ96NB1 174 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 RARRES2Q99969 163 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 GABARAPL3Q9BY60 117 aa3.27□□□□□ -1.89
CLK1-209ENST00000472679 ZNF282Q9UDV7 671 aaPredicted RBP3.27□□□□□ -1.89
CLK1-209ENST00000472679 TET2Q6N021 2002 aaPredicted RBP3.27□□□□□ -1.89
CLK1-209ENST00000472679 CDHR2Q9BYE9 1310 aa3.26□□□□□ -1.89
CLK1-209ENST00000472679 A0A1W2PPV9 198 aa3.26□□□□□ -1.89
CLK1-209ENST00000472679 BTBD17A6NE02 478 aa3.26□□□□□ -1.89
CLK1-209ENST00000472679 GOLGA8SH3BPF8 625 aa3.26□□□□□ -1.89
CLK1-209ENST00000472679 HAS3O00219 553 aa3.26□□□□□ -1.89
CLK1-209ENST00000472679 XKRYO14609 159 aa3.26□□□□□ -1.89
CLK1-209ENST00000472679 MGRN1O60291 552 aa3.26□□□□□ -1.89
CLK1-209ENST00000472679 SURF6O75683 361 aaKnown RBP3.26□□□□□ -1.89
CLK1-209ENST00000472679 ETS2P15036 469 aa3.26□□□□□ -1.89
CLK1-209ENST00000472679 IGFBP3P17936 291 aaPredicted RBP3.26□□□□□ -1.89
CLK1-209ENST00000472679 PRPHP41219 470 aa3.26□□□□□ -1.89
CLK1-209ENST00000472679 UBE2AP49459 152 aa3.26□□□□□ -1.89
CLK1-209ENST00000472679 ACTR1AP61163 376 aa3.26□□□□□ -1.89
CLK1-209ENST00000472679 RPS21P63220 83 aaKnown RBP3.26□□□□□ -1.89
CLK1-209ENST00000472679 PPIL2Q13356 520 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 211.8 ms