RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 OR52N5Q8NH56 324 aa9.76□□□□□ -0.85
COL4A6-205ENST00000468338 MAGEE2Q8TD90 523 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-205ENST00000468338 LIPHQ8WWY8 451 aa9.76□□□□□ -0.85
COL4A6-205ENST00000468338 AKAP1Q92667 903 aaKnown RBP eCLIP9.76□□□□□ -0.85
COL4A6-205ENST00000468338 LRR1Q96L50 414 aa9.76□□□□□ -0.85
COL4A6-205ENST00000468338 ASPNQ9BXN1 380 aa9.76□□□□□ -0.85
COL4A6-205ENST00000468338 FAM107BQ9H098 131 aa9.76□□□□□ -0.85
COL4A6-205ENST00000468338 NELFAQ9H3P2 528 aa9.76□□□□□ -0.85
COL4A6-205ENST00000468338 FKRPQ9H9S5 495 aa9.76□□□□□ -0.85
COL4A6-205ENST00000468338 OBP2BQ9NPH6 170 aa9.76□□□□□ -0.85
COL4A6-205ENST00000468338 RIMS3Q9UJD0 308 aa9.76□□□□□ -0.85
COL4A6-205ENST00000468338 SLC7A7Q9UM01 511 aa9.76□□□□□ -0.85
COL4A6-205ENST00000468338 A4GNTQ9UNA3 340 aa9.76□□□□□ -0.85
COL4A6-205ENST00000468338 SHISA9B4DS77 424 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 ZNF587BE7ETH6 402 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 CXCR6O00574 342 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 TSPAN19P0C672 248 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 HLA-DOBP13765 273 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 CBLP22681 906 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 PAX7P23759 505 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 CD40P25942 277 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 RBM34P42696 430 aaKnown RBP9.75□□□□□ -0.85
COL4A6-205ENST00000468338 OR1E2P47887 323 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 NUDT2P50583 147 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 SH3BGRP55822 239 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-205ENST00000468338 PSME3P61289 254 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 PMS2P3Q13401 168 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 PIN1Q13526 163 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-205ENST00000468338 ZNF672Q499Z4 452 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-205ENST00000468338 LRRC23Q53EV4 343 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-205ENST00000468338 C9orf135Q5VTT2 229 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 SHEQ5VZ18 495 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 PRSS57Q6UWY2 283 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 CBLL1Q75N03 491 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 SLC46A3Q7Z3Q1 461 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 NKAIN4Q8IVV8 208 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 UEVLDQ8IX04 471 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 ANKS4BQ8N8V4 417 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 OR1K1Q8NGR3 316 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 BCL2L2Q92843 193 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-205ENST00000468338 RCC1LQ96I51 464 aaKnown RBP9.75□□□□□ -0.85
COL4A6-205ENST00000468338 RADILQ96JH8 1075 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 ALKBH3Q96Q83 286 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-205ENST00000468338 OR2M2Q96R28 347 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 ZNF701Q9NV72 531 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-205ENST00000468338 TAS2R5Q9NYW4 299 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 ZNF229Q9UJW7 825 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 MGAT4BQ9UQ53 548 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 ARL2BPQ9Y2Y0 163 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 AMDHD2Q9Y303 409 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 NOX1Q9Y5S8 564 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 VPS13CQ709C8 3753 aa9.75□□□□□ -0.85
COL4A6-205ENST00000468338 FLNAP21333 2647 aaKnown RBP9.74□□□□□ -0.85
COL4A6-205ENST00000468338 ARPC4-TTLL3A0A0A6YYG9 625 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 A0A1W2PR80 420 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 OVOL3O00110 214 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 AKAP8O43823 692 aaKnown RBP9.74□□□□□ -0.85
COL4A6-205ENST00000468338 SLC43A1O75387 559 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 CH25HO95992 272 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 MT-ND1P03886 318 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 NQO1P15559 274 aaKnown RBP9.74□□□□□ -0.85
COL4A6-205ENST00000468338 PTNP21246 168 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 TAS2R41P59536 307 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 PRPS1P60891 318 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 C1DQ13901 141 aaKnown RBP9.74□□□□□ -0.85
COL4A6-205ENST00000468338 TBRG1Q3YBR2 411 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 PHYHD1Q5SRE7 291 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 TMEM108Q6UXF1 575 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 DEF8Q6ZN54 512 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 ZNF627Q7L945 461 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 VTCN1Q7Z7D3 282 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 WDFY1Q8IWB7 410 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 C20orf196Q8IYI0 205 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 LRRC17Q8N6Y2 441 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 PIK3C3Q8NEB9 887 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 KBTBD8Q8NFY9 601 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 LZICQ8WZA0 190 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 NEUROG1Q92886 237 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 FBXW5Q969U6 566 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 TXNDC15Q96J42 360 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 PRRC1Q96M27 445 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 HS6ST2Q96MM7 605 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 CCL19Q99731 98 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 GPR35Q9HC97 309 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 NANSQ9NR45 359 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 DLL4Q9NR61 685 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 FAM53CQ9NYF3 392 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 CRNNQ9UBG3 495 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-205ENST00000468338 MAGED1Q9Y5V3 778 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-205ENST00000468338 SNX13Q9Y5W8 968 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 RTTNQ86VV8 2226 aa9.74□□□□□ -0.85
COL4A6-205ENST00000468338 ARFGEF3Q5TH69 2177 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 HTR3EA5X5Y0 456 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 ABCD4O14678 606 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 FFAR1O14842 300 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 CLOCKO15516 846 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 SHOX2O60902 331 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-205ENST00000468338 SMPD2O60906 423 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 KRT33AO76009 404 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 PRSS23O95084 383 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms