RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 DAP3P51398 398 aaKnown RBP9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 IST1P53990 364 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 LSM11P83369 360 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 ARF1P84077 181 aaKnown RBP9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 BSPH1Q075Z2 132 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 DGCR6Q14129 220 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 TRIM25Q14258 630 aaKnown RBP9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 LAPTM4AQ15012 233 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 TBRG1Q3YBR2 411 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 DNAL1Q4LDG9 190 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 HIKESHIQ53FT3 197 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 PHYHD1Q5SRE7 291 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 C1QTNF12Q5T7M4 302 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 ANKRD16Q6P6B7 361 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 PODNL1Q6PEZ8 512 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 TBPL2Q6SJ96 375 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 TMEM108Q6UXF1 575 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 NHLRC1Q6VVB1 395 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 C20orf204Q6ZNR8 217 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 HDDC2Q7Z4H3 204 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 TSEN54Q7Z6J9 526 aaKnown RBP9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 OAFQ86UD1 273 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 MEX3DQ86XN8 651 aaKnown RBP9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 ZDHHC21Q8IVQ6 265 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 OR52J3Q8NH60 311 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 OR6X1Q8NH79 312 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 MOSPD2Q8NHP6 518 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 AKAP1Q92667 903 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 BCL2L2Q92843 193 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 ZNF566Q969W8 418 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 SLC25A44Q96H78 314 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 LRGUKQ96M69 825 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 TMEM204Q9BSN7 226 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 C1QTNF6Q9BXI9 259 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 NDEL1Q9GZM8 345 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 OBP2BQ9NPH6 170 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 NPAP1Q9NZP6 1156 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 MGAT4BQ9UQ53 548 aa9.28□□□□□ -0.92
TRAPPC12-213ENST00000461577 TRAV27A0A087WT01 109 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 ZNF99A8MXY4 864 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 ABCD4O14678 606 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 HS3ST1O14792 307 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 ATE1O95260 518 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 IGHG1P01857 330 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 PAX7P23759 505 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 PTAFRP25105 342 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 GPR4P46093 362 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 CAPZA2P47755 286 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 CLRN1P58418 232 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 CTXN1P60606 82 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 ANKDD1AQ495B1 522 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 ALG10Q5BKT4 473 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 LCN8Q6JVE9 175 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 SEZ6L2Q6UXD5 910 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 DEPDC4Q8N2C3 294 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 OR51A7Q8NH64 312 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 SLC7A13Q8TCU3 470 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 MAGEE2Q8TD90 523 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 ASB10Q8WXI3 467 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 POP5Q969H6 163 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 TMEM54Q969K7 222 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 CCDC124Q96CT7 223 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 BOD1Q96IK1 185 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 CLPTM1LQ96KA5 538 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 ZNF347Q96SE7 839 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 SEPHS2Q99611 448 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 CCL19Q99731 98 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 TRIM15Q9C019 465 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 IL1RAPQ9NPH3 570 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 GLTPQ9NZD2 209 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 STX18Q9P2W9 335 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 AURKCQ9UQB9 309 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 HIF3AQ9Y2N7 669 aa9.27□□□□□ -0.93
TRAPPC12-213ENST00000461577 ANKRD17O75179 2603 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 ARPC4-TTLL3A0A0A6YYG9 625 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 TRBV4-1A0A0J9YWV2 114 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 SEC14L2O76054 403 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 TSPAN19P0C672 248 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 PGA4P0DJD7 388 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 PGA3P0DJD8 388 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 ACADSP16219 412 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 CD40P25942 277 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 RRM2P31350 389 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 RPL4P36578 427 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 ART1P52961 327 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 TUBA1BP68363 451 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 TUBA4AP68366 448 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 CHRNB3Q05901 458 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 TOP3AQ13472 1001 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 TAF11Q15544 211 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 ZNF672Q499Z4 452 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 ZBED5Q49AG3 693 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 FAM98BQ52LJ0 330 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 ADAM5Q6NVV9 412 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 SLC22A25Q6T423 547 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 ZNF813Q6ZN06 617 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 TMPRSS11FQ6ZWK6 438 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 TUBA1AQ71U36 451 aa9.26□□□□□ -0.93
TRAPPC12-213ENST00000461577 WDFY1Q8IWB7 410 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms