RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CCT7Q99832 543 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 MRPL45Q9BRJ2 306 aaKnown RBP2.27□□□□□ -2.05
RFC4-211ENST00000460408 GON7Q9BXV9 100 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 RBKSQ9H477 322 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 NXF3Q9H4D5 531 aaKnown RBP2.27□□□□□ -2.05
RFC4-211ENST00000460408 NARFLQ9H6Q4 476 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 MCCC2Q9HCC0 563 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 AIG1Q9NVV5 245 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 ASB3Q9Y575 518 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 IFT172Q9UG01 1749 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 CRYBG1Q9Y4K1 1723 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 LMO7Q8WWI1 1683 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 TRANK1O15050 2925 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 MKI67P46013 3256 aaKnown RBP2.27□□□□□ -2.05
RFC4-211ENST00000460408 SLIT3O75094 1523 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 TRPM7Q96QT4 1865 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 MYOM3Q5VTT5 1437 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 MAST4O15021 2626 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 RBBP6Q7Z6E9 1792 aaKnown RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 MUC3AQ02505 3323 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 LAMA3Q16787 3333 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 C5P01031 1676 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 USP54Q70EL1 1684 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 A0A0G2JLM5 398 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 TCRBV9S1A1TA0A576 114 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 A8MUA0 341 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 H0Y9J4 135 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 ABCD4O14678 606 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 HSD17B6O14756 317 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 POLR2DO15514 142 aaKnown RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 MBTPS2O43462 519 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 MED7O43513 233 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 TIMM8AO60220 97 aaPredicted RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 FAM189A1O60320 539 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 UGT1A9O60656 530 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 CLDN9O95484 217 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 TSPAN12O95859 305 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 IGHDP01880 384 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 OPN1MWP04001 364 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 OPN1MW2P0DN77 364 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 OPN1MW3P0DN78 364 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 ZNF17P17021 662 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 ATP6V1B2P21281 511 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 COX7A1P24310 79 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 CCNE1P24864 410 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 HTR1EP28566 365 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 CEBPDP49716 269 aaPredicted RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 KPNA2P52292 529 aaKnown RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 CDK16Q00536 496 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 TGFBR3Q03167 851 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 NCBP1Q09161 790 aaKnown RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 GPNMBQ14956 572 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 OXA1LQ15070 435 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 KLHL38Q2WGJ6 581 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 MAJINQ3KP22 176 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 FILIP1LQ4L180 1135 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 C2orf83Q53S99 150 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 CST9Q5W186 159 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 KDELC1Q6UW63 502 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 RNF165Q6ZSG1 346 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 EFL1Q7Z2Z2 1120 aaKnown RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 LINC01555Q8NAE3 123 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 SUMF2Q8NBJ7 301 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 BHLHE23Q8NDY6 225 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 ELSPBP1Q96BH3 223 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 CMTM7Q96FZ5 175 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 TIMD4Q96H15 378 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 ITCHQ96J02 903 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 CYYR1Q96J86 154 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 RPRD1AQ96P16 312 aaPredicted RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 KCNA7Q96RP8 456 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 COPS8Q99627 209 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 TSG101Q99816 390 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 P2RY13Q9BPV8 354 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 HES7Q9BYE0 225 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 POLR2J2Q9GZM3 115 aaKnown RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 POLR2J3Q9H1A7 115 aaKnown RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 PRO3102Q9H379 93 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 SLC25A22Q9H936 323 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 LRRC40Q9H9A6 602 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 NHEJ1Q9H9Q4 299 aaPredicted RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 FN3KRPQ9HA64 309 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 MMP26Q9NRE1 261 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 THUMPD1Q9NXG2 353 aaKnown RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 HOXC10Q9NYD6 342 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 RPS6KB2Q9UBS0 482 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 ASF1AQ9Y294 204 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 PIGLQ9Y2B2 252 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 FASNP49327 2511 aaKnown RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 RGPD8O14715 1765 aaPredicted RBP2.26□□□□□ -2.05
RFC4-211ENST00000460408 PAPPA2Q9BXP8 1791 aa2.26□□□□□ -2.05
RFC4-211ENST00000460408 GPR179Q6PRD1 2367 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 LY75O60449 1722 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 KIAA1551Q9HCM1 1747 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 FLNBO75369 2602 aaKnown RBP2.25□□□□□ -2.05
RFC4-211ENST00000460408 POLR3AO14802 1390 aaPredicted RBP2.25□□□□□ -2.05
RFC4-211ENST00000460408 INSRP06213 1382 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 ABCC11Q96J66 1382 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 A0A1W2PPE3 182 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 FCMRO60667 390 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms