RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 UBE2QL1A1L167 161 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 ELOA3DA6NLF2 546 aaPredicted RBP16.09■□□□□ 0.17
PTPN6-204ENST00000456013 HNRNPA2B1P22626 353 aaKnown RBP16.09■□□□□ 0.17
PTPN6-204ENST00000456013 PLA2G7Q13093 441 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 SRSF5Q13243 272 aaKnown RBP16.09■□□□□ 0.17
PTPN6-204ENST00000456013 NNATQ16517 81 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 PCGF3Q3KNV8 242 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 ELOA3BQ3SY89 546 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 ZNF227Q86WZ6 799 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 ELOA3Q8NG57 546 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 ZNF417Q8TAU3 575 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 OR1F2PQ96R84 312 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 TAS2R8Q9NYW2 309 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 STEAP1Q9UHE8 339 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 OPN4Q9UHM6 478 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 TRAV8-7A0A075B6U6 113 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 OR4C45A6NMZ5 311 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 CDK2AP1O14519 115 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 ZNF254O75437 659 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 MAS1P04201 325 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 SPTBP11277 2137 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 HOXB2P14652 356 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 CTXN1P60606 82 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 ALG10Q5BKT4 473 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 OR4C16Q8NGL9 310 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 SIPA1Q96FS4 1042 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 OR10H1Q9Y4A9 318 aa16.09■□□□□ 0.17
PTPN6-204ENST00000456013 TXNDC12O95881 172 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 CTSBP07858 339 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 NMBP08949 121 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 CSF1P09603 554 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 PNMTP11086 282 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 POU3F2P20265 443 aaPredicted RBP16.08■□□□□ 0.17
PTPN6-204ENST00000456013 CALCRP30988 508 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 PTGS2P35354 604 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 GPR3P46089 330 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 MAP2K6P52564 334 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 PPP1CAP62136 330 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 UBE2IP63279 158 aaKnown RBP16.08■□□□□ 0.17
PTPN6-204ENST00000456013 IGLV3-21P80748 117 aaPredicted RBP16.08■□□□□ 0.17
PTPN6-204ENST00000456013 SFRP5Q5T4F7 317 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 WBP2NLQ6ICG8 309 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 TMUB2Q71RG4 321 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 SDR16C5Q8N3Y7 309 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 OR2G2Q8NGZ5 317 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 SCARB1Q8WTV0 552 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 ZDHHC1Q8WTX9 485 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 KLHL15Q96M94 604 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 LINC00052Q96N35 136 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 GINS4Q9BRT9 223 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 COMMD4Q9H0A8 199 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 SRA1Q9HD15 236 aaKnown RBP16.08■□□□□ 0.17
PTPN6-204ENST00000456013 FAM60AQ9NP50 221 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 SESN1Q9Y6P5 492 aa16.08■□□□□ 0.17
PTPN6-204ENST00000456013 A0A1B0GTH9 108 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 DCTN6O00399 190 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 RP2O75695 350 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 RNH1P13489 461 aaKnown RBP16.08■□□□□ 0.16
PTPN6-204ENST00000456013 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.08■□□□□ 0.16
PTPN6-204ENST00000456013 KLHL26Q53HC5 615 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 ANKRD16Q6P6B7 361 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 MAMSTRQ6ZN01 415 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 ATG4DQ86TL0 474 aaPredicted RBP16.08■□□□□ 0.16
PTPN6-204ENST00000456013 NAXDQ8IW45 347 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 C10orf53Q8N6V4 93 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 OR5M1Q8NGP8 315 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 C16orf52Q8NHV5 167 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 MOGAT1Q96PD6 335 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 C1QTNF6Q9BXI9 259 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 SEMA4CQ9C0C4 833 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 LAMP5Q9UJQ1 280 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 IKZF2Q9UKS7 526 aa16.08■□□□□ 0.16
PTPN6-204ENST00000456013 TMEM212A6NML5 194 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 PPP3CBP16298 524 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 H2BFSP57053 126 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 DEFB110Q30KQ9 67 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 PARM1Q6UWI2 310 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 LHFPL5Q8TAF8 219 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 GPR148Q8TDV2 347 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 FGF14Q92915 247 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 TMEM106AQ96A25 262 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 ELSPBP1Q96BH3 223 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 CXorf58Q96LI9 332 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 DGAT2Q96PD7 388 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 MNTQ99583 582 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 RPP25Q9BUL9 199 aaKnown RBP16.07■□□□□ 0.16
PTPN6-204ENST00000456013 MMP25Q9NPA2 562 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 CHD9Q3L8U1 2897 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 A0A0A6YYC8 382 aaPredicted RBP16.07■□□□□ 0.16
PTPN6-204ENST00000456013 GGT3PA6NGU5 568 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 TVP23AA6NH52 213 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 I3L1I5 382 aaPredicted RBP16.07■□□□□ 0.16
PTPN6-204ENST00000456013 ARPC5O15511 151 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 ASAH2BP0C7U1 165 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 GABRA1P14867 456 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 CFPP27918 469 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 C2orf68Q2NKX9 166 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 EMC4Q5J8M3 183 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 OOSP2Q86WS3 158 aa16.07■□□□□ 0.16
PTPN6-204ENST00000456013 ZNF676Q8N7Q3 588 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms