RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SEPHS2Q99611 448 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 NGBQ9NPG2 151 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 HIF3AQ9Y2N7 669 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 A0A1W2PPR1 153 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 GSC2O15499 205 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 DNAJC8O75937 253 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-202ENST00000452372 STAMBPO95630 424 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 ROS1P08922 2347 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 CD99P14209 185 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 RASSF2P50749 326 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 LAPTM4AQ15012 233 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 ANKDD1AQ495B1 522 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 FGD3Q5JSP0 725 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 C20orf196Q8IYI0 205 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 GPR137CQ8N3F9 429 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 OR6X1Q8NH79 312 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 MBD6Q96DN6 1003 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 PIK3IP1Q96FE7 263 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 ALKBH3Q96Q83 286 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-202ENST00000452372 FUZQ9BT04 418 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 MAGIXQ9H6Y5 334 aa17.51■□□□□ 0.39
COL9A3-202ENST00000452372 TRBV4-1A0A0J9YWV2 114 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 EFCAB9A8MZ26 197 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 SAGP10523 405 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-202ENST00000452372 LOXP28300 417 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-202ENST00000452372 MAGEA2P43356 314 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 SLC9A3P48764 834 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 BIDP55957 195 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 ROR2Q01974 943 aaKnown RBP17.5■□□□□ 0.39
COL9A3-202ENST00000452372 CAMK2DQ13557 499 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 PPA1Q15181 289 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 C1QTNF12Q5T7M4 302 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 ALKBH2Q6NS38 261 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 HMBOX1Q6NT76 420 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 WDFY1Q8IWB7 410 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 C17orf78Q8N4C9 275 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 OR52J3Q8NH60 311 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 MOSPD2Q8NHP6 518 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 LRGUKQ96M69 825 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 CADM1Q9BY67 442 aaKnown RBP17.5■□□□□ 0.39
COL9A3-202ENST00000452372 GPR35Q9HC97 309 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 INIPQ9NRY2 104 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 TMEM5Q9Y2B1 443 aa17.5■□□□□ 0.39
COL9A3-202ENST00000452372 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.49■□□□□ 0.39
COL9A3-202ENST00000452372 A0A1W2PRG6 482 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 GADD45GO95257 159 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 BCL10O95999 233 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 F13BP05160 661 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 DNASE1P24855 282 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 RPS4XP62701 263 aaKnown RBP17.49■□□□□ 0.39
COL9A3-202ENST00000452372 SPIBQ01892 262 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 SEC23BQ15437 767 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 PHYHD1Q5SRE7 291 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 CARD17Q5XLA6 110 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 SEZ6L2Q6UXD5 910 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 OAFQ86UD1 273 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 MEX3DQ86XN8 651 aaKnown RBP17.49■□□□□ 0.39
COL9A3-202ENST00000452372 OR4K5Q8NGD3 323 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 SLC17A5Q9NRA2 495 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 SLC25A15Q9Y619 301 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 CADP27708 2225 aa17.49■□□□□ 0.39
COL9A3-202ENST00000452372 ARID1AO14497 2285 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 SH3PXD2BA1X283 911 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 AQP12BA6NM10 295 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 M0R3G1 203 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 CDC42EP2O14613 210 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 CLOCKO15516 846 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 ATE1O95260 518 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 CDH2P19022 906 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-202ENST00000452372 RRM2P31350 389 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 GPR4P46093 362 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 NR1H2P55055 460 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 SH3BGRP55822 239 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-202ENST00000452372 CHRNB3Q05901 458 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 FHL1Q13642 323 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 ALG10Q5BKT4 473 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 PAMR1Q6UXH9 720 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 AQP12AQ8IXF9 295 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 WDR31Q8NA23 367 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 OR1K1Q8NGR3 316 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 OR6N1Q8NGY5 312 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 OR51A7Q8NH64 312 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 PLPPR2Q96GM1 343 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 SLC25A44Q96H78 314 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-202ENST00000452372 FAM46AQ96IP4 442 aaKnown RBP17.48■□□□□ 0.39
COL9A3-202ENST00000452372 ALPK1Q96QP1 1244 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 TNFRSF13CQ96RJ3 184 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 TRIM15Q9C019 465 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 CRLF2Q9HC73 371 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 B3GAT2Q9NPZ5 323 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 DLL4Q9NR61 685 aa17.48■□□□□ 0.39
COL9A3-202ENST00000452372 TRAV27A0A087WT01 109 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 NPIPB13A6NJU9 1138 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 NPIPB4C9JG80 1138 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 KRT36O76013 467 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 OMPP47874 163 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 CSNK1A1P48729 337 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 DAP3P51398 398 aaKnown RBP17.47■□□□□ 0.39
COL9A3-202ENST00000452372 HMGA2P52926 109 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 ADAM8P78325 824 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms