RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 TIMM23BQ5SRD1 257 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 KLHL24Q6TFL4 600 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 TMPRSS11FQ6ZWK6 438 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 C20orf196Q8IYI0 205 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 TMEM123Q8N131 208 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 C17orf78Q8N4C9 275 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 C1orf162Q8NEQ5 155 aaPredicted RBP12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 OR13C2Q8NGS9 318 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 OR6X1Q8NH79 312 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 MOSPD2Q8NHP6 518 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 ZNF566Q969W8 418 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 FAM46AQ96IP4 442 aaKnown RBP12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 RSRC1Q96IZ7 334 aaKnown RBP12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 LRR1Q96L50 414 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 ALPK1Q96QP1 1244 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 CLEC4MQ9H2X3 399 aaPredicted RBP12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 YY1AP1Q9H869 796 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 RASSF1Q9NS23 344 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 STX18Q9P2W9 335 aaKnown RBP12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 SLC7A8Q9UHI5 535 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 HIF3AQ9Y2N7 669 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 APCP25054 2843 aa12.34□□□□□ -0.43
GTF3C3-206ENST00000448539 OR5H1A6NKK0 313 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 CIB2O75838 187 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 IGHG1P01857 330 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 THBDP07204 575 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 RPL4P36578 427 aaKnown RBP12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 OMPP47874 163 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 CSNK1A1P48729 337 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 FOXG1P55316 489 aaPredicted RBP12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 SH3BGRP55822 239 aaPredicted RBP12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 SEC23BQ15437 767 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 GABRA6Q16445 453 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 ZBED5Q49AG3 693 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 BEX5Q5H9J7 111 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 C1orf146Q5VVC0 180 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 OR2T5Q6IEZ7 315 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 NHLRC1Q6VVB1 395 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 OR2T29Q8NH02 315 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 OR52N5Q8NH56 324 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 CANT1Q8WVQ1 401 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 PIK3IP1Q96FE7 263 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 SLC25A44Q96H78 314 aaPredicted RBP12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 MUS81Q96NY9 551 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 TNFRSF13CQ96RJ3 184 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 CHID1Q9BWS9 393 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 ULBP2Q9BZM5 246 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 REEP1Q9H902 201 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 CRLF2Q9HC73 371 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 GPR35Q9HC97 309 aa12.33□□□□□ -0.44
GTF3C3-206ENST00000448539 GNGT2O14610 69 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 CDC42EP2O14613 210 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 CST1P01037 141 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 TSPAN19P0C672 248 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 NR1H2P55055 460 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 CLRN1P58418 232 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 CTXN1P60606 82 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 RPS4XP62701 263 aaKnown RBP12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 TOP3AQ13472 1001 aaPredicted RBP12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 ACKR1Q16570 336 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 CEACAM16Q2WEN9 425 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 C22orf34Q6ZV56 151 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 IGFN1Q86VF2 1251 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 ADGRG5Q8IZF4 528 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 LINC00471Q8N535 108 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 OR1K1Q8NGR3 316 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 FUZQ9BT04 418 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 POFUT2Q9Y2G5 429 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 AMDHD2Q9Y303 409 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 SAMHD1Q9Y3Z3 626 aaKnown RBP12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 LYVE1Q9Y5Y7 322 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 FREM1Q5H8C1 2179 aa12.32□□□□□ -0.44
GTF3C3-206ENST00000448539 DCHS2Q6V1P9 2916 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 ANKHD1Q8IWZ3 2542 aaKnown RBP12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 TCRBV3S1A0A5B6 114 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 FAM221AA4D161 298 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 UNC119BA6NIH7 251 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 NPIPB13A6NJU9 1138 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 NPIPB4C9JG80 1138 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 RPL36A-HNRNPH2H7BZ11 118 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 CCNB2O95067 398 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 NDUFB2O95178 105 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 WNT11O96014 354 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 HRGP04196 525 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 ACADSP16219 412 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 LIMS1P48059 325 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 ERFP50548 548 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 HMGA2P52926 109 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 UBE2NP61088 152 aaKnown RBP12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 RPL27P61353 136 aaKnown RBP12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 ARF1P84077 181 aaKnown RBP12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 C1QTNF12Q5T7M4 302 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 FAM205BPQ63HN1 556 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 ANKRD16Q6P6B7 361 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 LINGO2Q7L985 606 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 GNPDA2Q8TDQ7 276 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 ASB10Q8WXI3 467 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 TXNIPQ9H3M7 391 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 ESRP2Q9H6T0 727 aaKnown RBP12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 SLC17A5Q9NRA2 495 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms