RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 IRGMA1A4Y4 181 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 A6NIZ1 184 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 SMAD9O15198 467 aaKnown RBP18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 C21orf33P30042 268 aaPredicted RBP18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 HOXD11P31277 338 aaPredicted RBP18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 RAP1BP61224 184 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 RPS3AP61247 264 aaKnown RBP18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 RAP1AP62834 184 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 LGALS3BPQ08380 585 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 RAB40BQ12829 278 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 FAM205BPQ63HN1 556 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 GTF2IRD2BQ6EKJ0 949 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 KCTD8Q6ZWB6 473 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 GTF2IRD2Q86UP8 949 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 TXNDC15Q96J42 360 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 TEAD3Q99594 435 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 VCX3AQ9NNX9 186 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 MRPS18AQ9NVS2 196 aaKnown RBP18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 ASB6Q9NWX5 421 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 DMXL2Q8TDJ6 3036 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 IGHG3P01860 377 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 NR1H2P55055 460 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 BIDP55957 195 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 MVKQ03426 396 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 TMED1Q13445 227 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 RPUSD3Q6P087 351 aaKnown RBP18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 LGALS12Q96DT0 336 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 TMEM80Q96HE8 168 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 ZNF845Q96IR2 970 aaPredicted RBP18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 SNX18Q96RF0 628 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 TAAR6Q96RI8 345 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 SIGLEC11Q96RL6 698 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 NMNAT2Q9BZQ4 307 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 SYT4Q9H2B2 425 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 SPRR3Q9UBC9 169 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 COMMD3-BMI1R4GMX3 469 aa18.23■□□□□ 0.51
VCPKMT-202ENST00000395860 PRSS37A4D1T9 235 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 CCDC182A6NF36 153 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 TRAF3IP2O43734 574 aaPredicted RBP18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 TFAP2AP05549 437 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 SPI1P17947 270 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 ATP6V1E1P36543 226 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 SLC25A1P53007 311 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 PLEKHN1Q494U1 663 aaPredicted RBP18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 B3GLCTQ6Y288 498 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 PM20D2Q8IYS1 436 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 SVOPQ8N4V2 548 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 OR51L1Q8NGJ5 315 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 OR52I1Q8NGK6 324 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 TIMP4Q99727 224 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 ARHGAP9Q9BRR9 750 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 PAQR5Q9NXK6 330 aaPredicted RBP18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 TNFRSF10DQ9UBN6 386 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 LHX6Q9UPM6 363 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 DNAJC13O75165 2243 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 NPIPA2E9PIF3 369 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 NPIPA3F8WFD2 350 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 APOL3O95236 402 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 FADS2O95864 444 aaKnown RBP18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 RPL5P46777 297 aaKnown RBP18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 RUNX1T1Q06455 604 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 PON3Q15166 354 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 POU4F3Q15319 338 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 NEDD8Q15843 81 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 INAQ16352 499 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 SLC35D3Q5M8T2 416 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 LCN1P1Q5VSP4 162 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 EEF1A1P5Q5VTE0 462 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 NHLRC1Q6VVB1 395 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 HDDC2Q7Z4H3 204 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 ROBO4Q8WZ75 1007 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 KISS1RQ969F8 398 aaPredicted RBP18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 EMC6Q9BV81 110 aa18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 SF3B5Q9BWJ5 86 aaKnown RBP18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 SRA1Q9HD15 236 aaKnown RBP18.22■□□□□ 0.51
VCPKMT-202ENST00000395860 RAB36O95755 333 aa18.21■□□□□ 0.51
VCPKMT-202ENST00000395860 GSTT1P30711 240 aa18.21■□□□□ 0.51
VCPKMT-202ENST00000395860 EMX1Q04741 257 aaPredicted RBP18.21■□□□□ 0.51
VCPKMT-202ENST00000395860 SHFQ7M4L6 423 aa18.21■□□□□ 0.51
VCPKMT-202ENST00000395860 EXD3Q8N9H8 876 aa18.21■□□□□ 0.51
VCPKMT-202ENST00000395860 OR9K2Q8NGE7 335 aa18.21■□□□□ 0.51
VCPKMT-202ENST00000395860 OR51G2Q8NGK0 314 aa18.21■□□□□ 0.51
VCPKMT-202ENST00000395860 OR2T4Q8NH00 348 aa18.21■□□□□ 0.51
VCPKMT-202ENST00000395860 TSSK2Q96PF2 358 aa18.21■□□□□ 0.51
VCPKMT-202ENST00000395860 ZNF71Q9NQZ8 489 aaPredicted RBP18.21■□□□□ 0.51
VCPKMT-202ENST00000395860 BATF3Q9NR55 127 aa18.21■□□□□ 0.51
VCPKMT-202ENST00000395860 VSX1Q9NZR4 365 aaPredicted RBP18.21■□□□□ 0.51
VCPKMT-202ENST00000395860 TRMUO75648 421 aaKnown RBP18.2■□□□□ 0.5
VCPKMT-202ENST00000395860 FAM87AP0C7U9 286 aa18.2■□□□□ 0.5
VCPKMT-202ENST00000395860 MAP2K4P45985 399 aa18.2■□□□□ 0.5
VCPKMT-202ENST00000395860 CLDN17P56750 224 aa18.2■□□□□ 0.5
VCPKMT-202ENST00000395860 SLC17A1Q14916 467 aa18.2■□□□□ 0.5
VCPKMT-202ENST00000395860 C3AR1Q16581 482 aa18.2■□□□□ 0.5
VCPKMT-202ENST00000395860 CREB3L2Q70SY1 520 aa18.2■□□□□ 0.5
VCPKMT-202ENST00000395860 FCRLAQ7L513 359 aa18.2■□□□□ 0.5
VCPKMT-202ENST00000395860 CHMP1BQ7LBR1 199 aa18.2■□□□□ 0.5
VCPKMT-202ENST00000395860 PROKR2Q8NFJ6 384 aa18.2■□□□□ 0.5
VCPKMT-202ENST00000395860 OR4F15Q8NGB8 312 aa18.2■□□□□ 0.5
VCPKMT-202ENST00000395860 OR6K6Q8NGW6 343 aa18.2■□□□□ 0.5
VCPKMT-202ENST00000395860 C9orf43Q8TAL5 461 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms