RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 CFIP05156 583 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 NRG3P56975 720 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 IL20RBQ6UXL0 311 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 APCDD1LQ8NCL9 501 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 IL17RDQ8NFM7 739 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 CCDC74BQ96LY2 380 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 TSPAN32Q96QS1 320 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 GAREM1Q9H706 876 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 ALPK2Q86TB3 2170 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 CFAP54Q96N23 3096 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 IGLV3-12A0A075B6K2 115 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 PRR32B1ATL7 298 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 GDF9O60383 454 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 EIF4E2O60573 245 aaKnown RBP13.47□□□□□ -0.25
PRNP-201ENST00000379440 LCN1P31025 176 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 SDHAP31040 664 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 SLC35D3Q5M8T2 416 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 LCN10Q6JVE6 187 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 CDH26Q8IXH8 852 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 SNAPC3Q92966 411 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 SLC25A36Q96CQ1 311 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 GRHPRQ9UBQ7 328 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 MRPS7Q9Y2R9 242 aaKnown RBP13.47□□□□□ -0.25
PRNP-201ENST00000379440 PCDHGB7Q9Y5F8 929 aa13.47□□□□□ -0.25
PRNP-201ENST00000379440 CDC40O60508 579 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRNP-201ENST00000379440 HIST1H2ABP04908 130 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 PGCP20142 388 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 DDOSTP39656 456 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 EVX1P49640 407 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 GBX2P52951 348 aaPredicted RBP13.46□□□□□ -0.25
PRNP-201ENST00000379440 SIRPAP78324 504 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 SQSTM1Q13501 440 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 CDK5R1Q15078 307 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 QPRTQ15274 297 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 MESTQ5EB52 335 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 HIST3H2AQ7L7L0 130 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 PXKQ7Z7A4 578 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 SYT9Q86SS6 491 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 CDH24Q86UP0 819 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 SYS1Q8N2H4 156 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 UBE2J2Q8N2K1 259 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 GDPD1Q8N9F7 314 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 EXD3Q8N9H8 876 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 OR4D9Q8NGE8 314 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 CEP76Q8TAP6 659 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 THAP4Q8WY91 577 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 HIST1H2ACQ93077 130 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 PDCD1LG2Q9BQ51 273 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 PPP1R3EQ9H7J1 279 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 RARRES3Q9UL19 164 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 NPFFR2Q9Y5X5 522 aa13.46□□□□□ -0.25
PRNP-201ENST00000379440 ADAMTS9Q9P2N4 1935 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 CCDC163A0A0D9SF12 145 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 LEUTXA8MZ59 168 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 PATE3B3GLJ2 98 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 C11orf98E9PRG8 122 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 OGG1O15527 345 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 BGLAPP02818 100 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 YES1P07947 543 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 ANKRD34CP0C6C1 535 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 PSKH1P11801 424 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 GP1BBP13224 206 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 GDI2P50395 445 aaKnown RBP13.46□□□□□ -0.26
PRNP-201ENST00000379440 FBXW4P57775 412 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 ACTA2P62736 377 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 ACTG2P63267 376 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 SCN1BQ07699 218 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 CBFBQ13951 182 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 MZT2AQ6P582 158 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 DEFB123Q8N688 67 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 NFAM1Q8NET5 270 aaPredicted RBP13.46□□□□□ -0.26
PRNP-201ENST00000379440 SETD6Q8TBK2 473 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 SOSTQ9BQB4 213 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 AKIRIN1Q9H9L7 192 aaPredicted RBP13.46□□□□□ -0.26
PRNP-201ENST00000379440 TAS2R5Q9NYW4 299 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 GLTPQ9NZD2 209 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 TEKT2Q9UIF3 430 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 PCDHGB2Q9Y5G2 931 aa13.46□□□□□ -0.26
PRNP-201ENST00000379440 TRBV2A0A0J9YWF9 115 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 ADAM10O14672 748 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 ALOX12BO75342 701 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 ELK1P19419 428 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 HOXA6P31267 233 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 P2RX1P51575 399 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 SSTP61278 116 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 DCDP81605 110 aaKnown RBP13.45□□□□□ -0.26
PRNP-201ENST00000379440 IL18Q14116 193 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 TRAM1Q15629 374 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 Q5BKY6 102 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 FAM69BQ5VUD6 431 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 GPR119Q8TDV5 335 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 EDAQ92838 391 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 SMIM19Q96E16 107 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 OCIAD1Q9NX40 245 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 TMEM72A0PK05 275 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 TVP23AA6NH52 213 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 SSX5O60225 188 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 SUSD5O60279 629 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 SLC25A12O75746 678 aa13.45□□□□□ -0.26
PRNP-201ENST00000379440 GPANK1O95872 356 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms