RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 OMPP47874 163 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 LIMS1P48059 325 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 ZNF83P51522 516 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 BSPH1Q075Z2 132 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 SPOCK1Q08629 439 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 FGD3Q5JSP0 725 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 PAMR1Q6UXH9 720 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 ZNF704Q6ZNC4 412 aaPredicted RBP13.98□□□□□ -0.17
C11orf88-202ENST00000375618 P2RY8Q86VZ1 359 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 DHFR2Q86XF0 187 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 ZDHHC21Q8IVQ6 265 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 RNF113BQ8IZP6 322 aaKnown RBP13.98□□□□□ -0.17
C11orf88-202ENST00000375618 GPR137CQ8N3F9 429 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 OR6X1Q8NH79 312 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 ASB10Q8WXI3 467 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 TMEM54Q969K7 222 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 FAM46AQ96IP4 442 aaKnown RBP13.98□□□□□ -0.17
C11orf88-202ENST00000375618 TNFRSF13CQ96RJ3 184 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 USB1Q9BQ65 265 aaKnown RBP13.98□□□□□ -0.17
C11orf88-202ENST00000375618 INIPQ9NRY2 104 aa13.98□□□□□ -0.17
C11orf88-202ENST00000375618 EFCAB9A8MZ26 197 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 GYG2O15488 501 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 AKAP8O43823 692 aaKnown RBP13.97□□□□□ -0.17
C11orf88-202ENST00000375618 ATE1O95260 518 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 FABP3P05413 133 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 IST1P53990 364 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 SPIBQ01892 262 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 ACKR1Q16570 336 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 ARMC4Q5T2S8 1044 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 OR7E24Q6IFN5 339 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 HMBOX1Q6NT76 420 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 LRFN4Q6PJG9 635 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 TMPRSS11FQ6ZWK6 438 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 PIWIL3Q7Z3Z3 882 aaKnown RBP13.97□□□□□ -0.17
C11orf88-202ENST00000375618 ABHD12BQ7Z5M8 362 aaPredicted RBP13.97□□□□□ -0.17
C11orf88-202ENST00000375618 C17orf78Q8N4C9 275 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 OR4K5Q8NGD3 323 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 OR51A7Q8NH64 312 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 MUCL1Q96DR8 90 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 ASB9Q96DX5 294 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 LRR1Q96L50 414 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 MUC13Q9H3R2 512 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 CCM2LQ9NUG4 571 aaPredicted RBP13.97□□□□□ -0.17
C11orf88-202ENST00000375618 VNN3Q9NY84 501 aa13.97□□□□□ -0.17
C11orf88-202ENST00000375618 AKAP6Q13023 2319 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 SH3PXD2BA1X283 911 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 ZNF726A6NNF4 738 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 PGA4P0DJD7 388 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 PGA3P0DJD8 388 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 SAGP10523 405 aaPredicted RBP13.96□□□□□ -0.17
C11orf88-202ENST00000375618 ITGA2P17301 1181 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 RRM2P31350 389 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 MAGEA2P43356 314 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 CSNK1A1P48729 337 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 NR1H2P55055 460 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 FXYD6P3P58550 94 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 TGFBR3Q03167 851 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 DNAL1Q4LDG9 190 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 ANKRD16Q6P6B7 361 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 KBTBD8Q8NFY9 601 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 OR6N1Q8NGY5 312 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 HTRA1Q92743 480 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 BTBD10Q9BSF8 475 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 CADM1Q9BY67 442 aaKnown RBP13.96□□□□□ -0.17
C11orf88-202ENST00000375618 MRPL13Q9BYD1 178 aaKnown RBP13.96□□□□□ -0.17
C11orf88-202ENST00000375618 UBTD1Q9HAC8 227 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 NOX3Q9HBY0 568 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 ITGB1BP2Q9UKP3 347 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 SPG11Q96JI7 2443 aa13.96□□□□□ -0.17
C11orf88-202ENST00000375618 AKAP9Q99996 3911 aa13.96□□□□□ -0.18
C11orf88-202ENST00000375618 IGKV1D-43A0A0B4J1Z2 117 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 HTR3EA5X5Y0 456 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 SHISA9B4DS77 424 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 MCIDASD6RGH6 385 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 TRMUO75648 421 aaKnown RBP13.95□□□□□ -0.18
C11orf88-202ENST00000375618 GADD45GO95257 159 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 BCL10O95999 233 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 CD53P19397 219 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 TOP3AQ13472 1001 aaPredicted RBP13.95□□□□□ -0.18
C11orf88-202ENST00000375618 ALG10Q5BKT4 473 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 MTX3Q5HYI7 312 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 ADAM5Q6NVV9 412 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 ZER1Q7Z7L7 766 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 OAFQ86UD1 273 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 ADGRG5Q8IZF4 528 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 CLDN22Q8N7P3 220 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 HDAC2Q92769 488 aaKnown RBP13.95□□□□□ -0.18
C11orf88-202ENST00000375618 MCUR1Q96AQ8 359 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 NMD3Q96D46 503 aaKnown RBP13.95□□□□□ -0.18
C11orf88-202ENST00000375618 SLC25A44Q96H78 314 aaPredicted RBP13.95□□□□□ -0.18
C11orf88-202ENST00000375618 ADAD1Q96M93 576 aaKnown RBP13.95□□□□□ -0.18
C11orf88-202ENST00000375618 ZNF347Q96SE7 839 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 ULBP2Q9BZM5 246 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 SEC61A2Q9H9S3 476 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 GLTPQ9NZD2 209 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 ZNF346Q9UL40 294 aaKnown RBP13.95□□□□□ -0.18
C11orf88-202ENST00000375618 AMDHD2Q9Y303 409 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 RNF115Q9Y4L5 304 aa13.95□□□□□ -0.18
C11orf88-202ENST00000375618 ARPC4-TTLL3A0A0A6YYG9 625 aa13.94□□□□□ -0.18
C11orf88-202ENST00000375618 A0A1W2PRG6 482 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms