RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 OIT3Q8WWZ8 545 aa18.22■□□□□ 0.51
SRSF4-201ENST00000373795 SNAPC3Q92966 411 aa18.22■□□□□ 0.51
SRSF4-201ENST00000373795 FREM2Q5SZK8 3169 aa18.21■□□□□ 0.51
SRSF4-201ENST00000373795 FADS1O60427 444 aa18.21■□□□□ 0.51
SRSF4-201ENST00000373795 DGCR2P98153 550 aa18.21■□□□□ 0.51
SRSF4-201ENST00000373795 OVCH1Q7RTY7 1134 aa18.21■□□□□ 0.51
SRSF4-201ENST00000373795 PHF21AQ96BD5 680 aa18.21■□□□□ 0.51
SRSF4-201ENST00000373795 Q96M85 177 aa18.21■□□□□ 0.51
SRSF4-201ENST00000373795 EMP2P54851 167 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 POU4F2Q12837 409 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 CEP78Q5JTW2 689 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 MTFR2Q6P444 385 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 TEX19Q8NA77 164 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 METTL21AQ8WXB1 218 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 YIPF5Q969M3 257 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 ZC3H10Q96K80 434 aaKnown RBP18.2■□□□□ 0.5
SRSF4-201ENST00000373795 DDOQ99489 341 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 BRD7Q9NPI1 651 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 NPFFR2Q9Y5X5 522 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 FAM171A2A8MVW0 826 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 FABP7O15540 132 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 EPXP11678 715 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 FBXW4P57775 412 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 PRPS1P60891 318 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 CDK5R1Q15078 307 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 FAM199XQ6PEV8 388 aaPredicted RBP18.2■□□□□ 0.5
SRSF4-201ENST00000373795 SLC43A2Q8N370 569 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 SMIM19Q96E16 107 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 OR14A2Q96R54 314 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 CNN2Q99439 309 aaKnown RBP18.2■□□□□ 0.5
SRSF4-201ENST00000373795 WDR77Q9BQA1 342 aaPredicted RBP18.2■□□□□ 0.5
SRSF4-201ENST00000373795 SEMA4CQ9C0C4 833 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 MED28Q9H204 178 aa18.2■□□□□ 0.5
SRSF4-201ENST00000373795 AK6Q9Y3D8 172 aaKnown RBP18.2■□□□□ 0.5
SRSF4-201ENST00000373795 TEX13CA0A0J9YWL9 993 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 A0A1W2PQD3 144 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 OGG1O15527 345 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 ASAH2BP0C7U1 165 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 CDKN2AP42771 156 aaKnown RBP18.19■□□□□ 0.5
SRSF4-201ENST00000373795 SLC6A8P48029 635 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 RPS11P62280 158 aaKnown RBP eCLIP18.19■□□□□ 0.57e-8■■□□□ 13.7
SRSF4-201ENST00000373795 PAPD4Q6PIY7 484 aaKnown RBP18.19■□□□□ 0.5
SRSF4-201ENST00000373795 SIAH3Q8IW03 269 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 TOMM5Q8N4H5 51 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 TMEM105Q8N8V8 129 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 LPAR4Q99677 370 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 PDCD1LG2Q9BQ51 273 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 GNG8Q9UK08 70 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 ZNF346Q9UL40 294 aaKnown RBP18.19■□□□□ 0.5
SRSF4-201ENST00000373795 HIF3AQ9Y2N7 669 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 KIF26BQ2KJY2 2108 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 TRAV1-2A0A0B4J238 106 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 NOTOA8MTQ0 251 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 ARPC3O15145 178 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 CXCR1P25024 350 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 GIFP27352 417 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 LCN1P31025 176 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 GNG2P59768 71 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 SIRPAP78324 504 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 SLC35F2Q8IXU6 374 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 SNX33Q8WV41 574 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 ORAI1Q96D31 301 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 TSSK2Q96PF2 358 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 CCNL2Q96S94 520 aaPredicted RBP18.19■□□□□ 0.5
SRSF4-201ENST00000373795 SPSB2Q99619 263 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 DPAGT1Q9H3H5 408 aa18.19■□□□□ 0.5
SRSF4-201ENST00000373795 VSTM2BA6NLU5 285 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 MEN1O00255 615 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 YKT6O15498 198 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 FLRT2O43155 660 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 CDC40O60508 579 aaKnown RBP eCLIP18.18■□□□□ 0.51e-7■■■□□ 16.2
SRSF4-201ENST00000373795 EIF4E2O60573 245 aaKnown RBP18.18■□□□□ 0.5
SRSF4-201ENST00000373795 DHFRP00374 187 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 OR2T7P0C7T2 308 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 ZNF28P17035 718 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 PSMB10P40306 273 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 GBX2P52951 348 aaPredicted RBP18.18■□□□□ 0.5
SRSF4-201ENST00000373795 CTXN1P60606 82 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 ALG10Q5BKT4 473 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 PRSS45Q7RTY3 260 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 IZUMO1Q8IYV9 350 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 LRRC75AQ8NAA5 344 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 OR11H7Q8NGC8 314 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 OR2T27Q8NH04 317 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 LIPHQ8WWY8 451 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 SCMH1Q96GD3 660 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 TRAF4Q9BUZ4 470 aaPredicted RBP18.18■□□□□ 0.5
SRSF4-201ENST00000373795 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.18■□□□□ 0.57e-24■□□□□ 10.9
SRSF4-201ENST00000373795 GHITMQ9H3K2 345 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 COPS3Q9UNS2 423 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 TRBV2A0A0J9YWF9 115 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 TMEM200CA6NKL6 621 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 ADAM10O14672 748 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 SELENOFO60613 162 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 UBL3O95164 117 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 SERPINA3P01011 423 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 TCRBP04435 133 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 CCR6P51684 374 aa18.18■□□□□ 0.5
SRSF4-201ENST00000373795 RPL18Q07020 188 aaKnown RBP18.18■□□□□ 0.5
SRSF4-201ENST00000373795 CCDC58Q4VC31 144 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms